BLASTX nr result

ID: Coptis23_contig00033047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033047
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243...    79   5e-13
emb|CBI20392.3| unnamed protein product [Vitis vinifera]               79   5e-13
gb|ADL36767.1| MYB domain class transcription factor [Malus x do...    72   6e-11
ref|XP_002305647.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002330419.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243528 [Vitis vinifera]
          Length = 361

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/133 (36%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
 Frame = +1

Query: 1   CTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQNTEPIVWEQNA----EGIEDYAPQL 168
           C T S   TPFL++ QLMQA  E    +PT F+YQN+ P +W+ +            P L
Sbjct: 221 CPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQNSLPNLWQVHGGHPITAASFTNPTL 280

Query: 169 DYGYFNQSIVDLLNENQNIDSNDNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERD 348
            +     SI        N  SN+ QNF                     TY   STEDERD
Sbjct: 281 SFDSIPSSITGHQTLKSNAVSNNTQNFSFDSVLSTPSSTSTPLDSSQMTYAKGSTEDERD 340

Query: 349 SYCSNMLKFYEIP 387
           SYCSN L F +IP
Sbjct: 341 SYCSNFLMF-DIP 352


>emb|CBI20392.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/133 (36%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
 Frame = +1

Query: 1   CTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQNTEPIVWEQNA----EGIEDYAPQL 168
           C T S   TPFL++ QLMQA  E    +PT F+YQN+ P +W+ +            P L
Sbjct: 201 CPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQNSLPNLWQVHGGHPITAASFTNPTL 260

Query: 169 DYGYFNQSIVDLLNENQNIDSNDNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERD 348
            +     SI        N  SN+ QNF                     TY   STEDERD
Sbjct: 261 SFDSIPSSITGHQTLKSNAVSNNTQNFSFDSVLSTPSSTSTPLDSSQMTYAKGSTEDERD 320

Query: 349 SYCSNMLKFYEIP 387
           SYCSN L F +IP
Sbjct: 321 SYCSNFLMF-DIP 332


>gb|ADL36767.1| MYB domain class transcription factor [Malus x domestica]
          Length = 352

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/121 (39%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
 Frame = +1

Query: 43  AQLMQA--NVEQFQTSPTSFSYQNTEPIVWEQN---AEGIEDYAPQLDYGYF----NQSI 195
           +QLMQ   NVE + +S + F  QN++   W+ N   +   E+Y     + YF    +Q++
Sbjct: 221 SQLMQQQPNVE-YPSSLSDFRSQNSQLNEWQSNVGTSNFTEEYVELPSFAYFGSEQHQTV 279

Query: 196 VDLLNENQNIDSND-NQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERDSYCSNMLK 372
           +DL  EN N  SN+ NQNF                     TYFNS TEDER+SYCSNMLK
Sbjct: 280 LDLSPENSNFHSNNSNQNFSFTSVFSTPSSSPTTLNSNSTTYFNSGTEDERESYCSNMLK 339

Query: 373 F 375
           F
Sbjct: 340 F 340


>ref|XP_002305647.1| predicted protein [Populus trichocarpa] gi|222848611|gb|EEE86158.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
 Frame = +1

Query: 1   CTTPSIH-CTPFLDDAQLMQANVEQFQTSP-TSFSYQNTEPIV---WEQNAEG---IEDY 156
           CTT +   C  F ++A++M  NV+Q+Q+S  T+FS  N++      W+ N  G    EDY
Sbjct: 226 CTTLTTSPCVTFSNEARIMDPNVDQYQSSTITNFSSPNSQFSTHDQWQNNGMGSNLAEDY 285

Query: 157 -----APQLDYGYFNQSIVDLLNENQNIDSND-NQNFXXXXXXXXXXXXXXXXXXXXXTY 318
                +     GY+   ++D  +E     SN  NQNF                     TY
Sbjct: 286 YVPAVSSYNSNGYYGSDLMDPSSETSTFISNSSNQNFGFASVLSTPSSSPTPLNSNS-TY 344

Query: 319 FNSST-EDERDSYCSNMLKFYEIP 387
            NSS+ EDER+SYCSN+LKF EIP
Sbjct: 345 INSSSAEDERESYCSNILKF-EIP 367


>ref|XP_002330419.1| predicted protein [Populus trichocarpa] gi|222871804|gb|EEF08935.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
 Frame = +1

Query: 31  FLDDAQLMQANVEQFQTSPTSFSYQNTEPIVWEQNAEGIEDYAPQL--DYGYFNQSIVDL 204
           FL + Q+  AN+EQ   +PT+FS QN+    W  N E   D    L  +Y Y + +   +
Sbjct: 226 FLYETQISAANLEQLSCNPTNFSCQNSLRSSWHANGESTPDICESLMSNYVYHDSNNKPI 285

Query: 205 LNENQNIDSNDNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERDSYCSNMLKF 375
            N+   I     Q+                      TY N STEDE+DSYCSNML F
Sbjct: 286 TND---ISFETLQSLSFGSLLSTPSSSTTPLRSSSTTYVNVSTEDEKDSYCSNMLVF 339


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