BLASTX nr result
ID: Coptis23_contig00033033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00033033
(297 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi... 127 7e-28
emb|CBI29222.3| unnamed protein product [Vitis vinifera] 127 7e-28
ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arab... 126 2e-27
ref|XP_002519901.1| pentatricopeptide repeat-containing protein,... 125 4e-27
ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|2... 123 2e-26
>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 127 bits (320), Expect = 7e-28
Identities = 55/95 (57%), Positives = 72/95 (75%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV QG++PD FTYN L+HG+C + K++EAV LWNE K L+P+V+TY VMIDGYCKA +
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGN 11
+EEG LF E+++ +E N V+YN LI YCR GN
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713
Score = 92.4 bits (228), Expect = 3e-17
Identities = 38/96 (39%), Positives = 68/96 (70%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M S+G+ P TY++L+HG+C++ +ME+A L +E+++EGL+P+V Y+ +I GYCK +
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+++ VN+ EM S+ + PN + Y +I GY + G++
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDM 819
Score = 85.1 bits (209), Expect = 5e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
++ +G ++ T NAL+HGLC M+EAV L ++ G + D TY+ +I G CK +
Sbjct: 549 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+EEG L EMV G+EP+ YN LI G CR G L
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644
Score = 84.0 bits (206), Expect = 1e-14
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ +G D TYN L+ G C K+EE L E+ ++G+ PD FTY+++I G C+ +
Sbjct: 584 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 643
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCR 20
L+E VNL++E S + PNV Y +I GYC+
Sbjct: 644 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 675
Score = 82.0 bits (201), Expect = 5e-14
Identities = 37/96 (38%), Positives = 58/96 (60%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M G+ P++ TYN L+HGLC ++EA ++ ++G+ + TYSV+I+G K ++
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
E ++ E + G PN V+YN LI GYC+ GNL
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434
Score = 74.7 bits (182), Expect = 7e-12
Identities = 37/98 (37%), Positives = 55/98 (56%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+++Q L+ + YN L+ C EA L ++++ +G+ P TYS +I G C R
Sbjct: 689 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 748
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNLPK 2
+E+ L EM G+ PNVV Y ALIGGYC+ G + K
Sbjct: 749 MEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786
Score = 73.9 bits (180), Expect = 1e-11
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV G+ + TY+ L++GL + K EA + E +G P+ Y+ +IDGYCK
Sbjct: 374 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 433
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
L + + + +MVS G+ PN V N++I G+C+ G +
Sbjct: 434 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 469
Score = 72.8 bits (177), Expect = 3e-11
Identities = 34/96 (35%), Positives = 59/96 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+ ++G+ P + T L+ L ++E++ ++ E R+G+ PDV+ +S I+ +CK +
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVF-ETMRQGVSPDVYLFSTAINAFCKGGK 328
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+E+ + LF +M G+ PNVV YN LI G C+ GNL
Sbjct: 329 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MVS+G+ P+ T N+++ G C + +ME+A + E+ G + ++ +I C R
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQG 14
E + EM+ M PN L L+GG C++G
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEG 537
Score = 62.4 bits (150), Expect = 4e-08
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ + ++P+ L+ GLC K +AV LW L +G ++ T + +I G CK
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
++E V L +M+ G + + YN LI G C++G +
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 609
>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 127 bits (320), Expect = 7e-28
Identities = 55/95 (57%), Positives = 72/95 (75%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV QG++PD FTYN L+HG+C + K++EAV LWNE K L+P+V+TY VMIDGYCKA +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGN 11
+EEG LF E+++ +E N V+YN LI YCR GN
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 646
Score = 92.4 bits (228), Expect = 3e-17
Identities = 38/96 (39%), Positives = 68/96 (70%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M S+G+ P TY++L+HG+C++ +ME+A L +E+++EGL+P+V Y+ +I GYCK +
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+++ VN+ EM S+ + PN + Y +I GY + G++
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDM 752
Score = 85.1 bits (209), Expect = 5e-15
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
++ +G ++ T NAL+HGLC M+EAV L ++ G + D TY+ +I G CK +
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+EEG L EMV G+EP+ YN LI G CR G L
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 577
Score = 84.0 bits (206), Expect = 1e-14
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ +G D TYN L+ G C K+EE L E+ ++G+ PD FTY+++I G C+ +
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 576
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCR 20
L+E VNL++E S + PNV Y +I GYC+
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 608
Score = 82.0 bits (201), Expect = 5e-14
Identities = 37/96 (38%), Positives = 58/96 (60%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M G+ P++ TYN L+HGLC ++EA ++ ++G+ + TYSV+I+G K ++
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
E ++ E + G PN V+YN LI GYC+ GNL
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367
Score = 74.7 bits (182), Expect = 7e-12
Identities = 37/98 (37%), Positives = 55/98 (56%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+++Q L+ + YN L+ C EA L ++++ +G+ P TYS +I G C R
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 681
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNLPK 2
+E+ L EM G+ PNVV Y ALIGGYC+ G + K
Sbjct: 682 MEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719
Score = 73.9 bits (180), Expect = 1e-11
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV G+ + TY+ L++GL + K EA + E +G P+ Y+ +IDGYCK
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
L + + + +MVS G+ PN V N++I G+C+ G +
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402
Score = 72.8 bits (177), Expect = 3e-11
Identities = 34/96 (35%), Positives = 59/96 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+ ++G+ P + T L+ L ++E++ ++ E R+G+ PDV+ +S I+ +CK +
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVF-ETMRQGVSPDVYLFSTAINAFCKGGK 261
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+E+ + LF +M G+ PNVV YN LI G C+ GNL
Sbjct: 262 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MVS+G+ P+ T N+++ G C + +ME+A + E+ G + ++ +I C R
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQG 14
E + EM+ M PN L L+GG C++G
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEG 470
Score = 62.4 bits (150), Expect = 4e-08
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ + ++P+ L+ GLC K +AV LW L +G ++ T + +I G CK
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
++E V L +M+ G + + YN LI G C++G +
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/90 (30%), Positives = 49/90 (54%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M S + P+ TY ++ G M+ A L +E+ +G++PD TY+V+ +G+CK +
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGY 26
+EEG + M G+ + + Y L+ G+
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
>ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata] gi|297313772|gb|EFH44195.1| hypothetical protein
ARALYDRAFT_492917 [Arabidopsis lyrata subsp. lyrata]
Length = 817
Score = 126 bits (317), Expect = 2e-27
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV +GLKPD +TY+ L+ GL ++ K+EEA+ W + KR G+IPDV+TYSVMIDG CKA+R
Sbjct: 558 MVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAER 617
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
EEG LF EM+S+ ++PN V+YN LIG YCR G L
Sbjct: 618 TEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL 653
Score = 78.6 bits (192), Expect = 5e-13
Identities = 38/96 (39%), Positives = 59/96 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M +G+ P+ TY +L+ G+ + ++EEA L E++ EGL P+VF Y+ +IDGY K +
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+ + L EM S + PN + Y +IGGY R GN+
Sbjct: 723 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 758
Score = 68.9 bits (167), Expect = 4e-10
Identities = 28/89 (31%), Positives = 56/89 (62%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+V +G+ PD++ + ++ C K+EEA+ L+++++ G++P+V TY+ +IDG + R
Sbjct: 243 VVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR 302
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGG 29
+E +MV G+EP ++ Y+ L+ G
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKG 331
Score = 68.2 bits (165), Expect = 7e-10
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+S L+P+ YN L+ C ++ A+ L ++K +G+ P+ TY+ +I G R
Sbjct: 628 MMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 687
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNLPK 2
+EE L EM G+EPNV Y ALI GY + G + K
Sbjct: 688 VEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/98 (33%), Positives = 53/98 (54%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M G+ P++ TYN ++ GL + +EA ++ G+ P + TYS+++ G KAKR
Sbjct: 278 MEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKR 337
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNLPK 2
+ + + EM G PNV++YN LI G+L K
Sbjct: 338 IGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNK 375
Score = 65.9 bits (159), Expect = 3e-09
Identities = 33/96 (34%), Positives = 53/96 (55%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M +GL+P++F Y AL+ G + +M + L E+ + + P+ TY+VMI GY +
Sbjct: 698 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 757
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+ E L HEM G+ P+ + Y I GY +QG +
Sbjct: 758 VTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGV 793
Score = 63.5 bits (153), Expect = 2e-08
Identities = 31/94 (32%), Positives = 52/94 (55%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV +G++P + TY+ L+ GL ++ +A + E+ +G P+V Y+ +ID +A
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQG 14
L + + + MVS G+ YN LI GYC+ G
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSG 406
Score = 62.8 bits (151), Expect = 3e-08
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = -3
Query: 283 GLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKRLEEG 104
G+ PD++TY+ ++ G C + EE L++E+ L P+ Y+ +I YC++ RL
Sbjct: 597 GMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMA 656
Query: 103 VNLFHEMVSHGMEPNVVLYNALIGG 29
+ L +M G+ PN Y +LI G
Sbjct: 657 LELREDMKHKGISPNSATYTSLIKG 681
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ + + P L+ GLC K +AV LW + +G + D T + ++ G C+A +
Sbjct: 453 MLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGK 512
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYC 23
LEEG + E++ G + V YN LI G C
Sbjct: 513 LEEGFRIQKEILGRGFVMDRVSYNTLISGCC 543
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/94 (29%), Positives = 52/94 (55%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+ ++G+ P T N L+ L + ++ ++ + + G+ PDV+ ++ I+ +CK +
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCKGGK 267
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQG 14
+EE + LF +M G+ PNVV YN +I G G
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSG 301
>ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540947|gb|EEF42505.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 777
Score = 125 bits (314), Expect = 4e-27
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV +G++PD++TYN L+HGLC++ K+EEA GLW+E K+ G PD +TY +MIDGYCKA R
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+EEG LF EMV+ +E N V+Y LI YC GN+
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598
Score = 83.2 bits (204), Expect = 2e-14
Identities = 38/96 (39%), Positives = 59/96 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M G+ P++ TYN ++HGLC +++EA ++++E + P + TY V+I+G K +R
Sbjct: 223 MEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLER 282
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+E + EM G PN V+YN LI GYCR GN+
Sbjct: 283 FDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318
Score = 77.0 bits (188), Expect = 1e-12
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M +GL P++ Y AL+ G C + +M + + E+ + P+ TY++MI+G+CK
Sbjct: 643 MRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGN 702
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
++ L +EM G+ P+ V YNAL G+C++G +
Sbjct: 703 MKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKM 738
Score = 76.6 bits (187), Expect = 2e-12
Identities = 36/96 (37%), Positives = 54/96 (56%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
++ +G + T NAL+HGLC EEA L E+ GL+ D +Y+ +I CK +
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+EEG L EMV G++P++ YN L+ G C G +
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKI 528
Score = 75.5 bits (184), Expect = 4e-12
Identities = 33/96 (34%), Positives = 61/96 (63%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M S+G+ TY++L+HGL ++ ++ A L +E+++EGL P+V Y+ +I GYCK +
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+ + ++ EM + + PN + Y +I G+C+ GN+
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNM 703
Score = 72.0 bits (175), Expect = 5e-11
Identities = 31/96 (32%), Positives = 55/96 (57%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M + +KP + TY L++GL + + +EA + E+ G P+ Y+ +IDGYC+
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+ + + +M+S+G+ PN V N+LI GYC+ +
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQM 353
Score = 67.8 bits (164), Expect = 9e-10
Identities = 30/96 (31%), Positives = 57/96 (59%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+ ++GL P + T N L+ L +++ + +++ + G+ PDV+ +S M++ +C R
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+++ + LF +M G+ PNVV YN +I G C+ G L
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRL 248
Score = 63.9 bits (154), Expect = 1e-08
Identities = 33/98 (33%), Positives = 49/98 (50%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV+ ++ + Y L+ C M EA L ++++ G+ TYS +I G
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNLPK 2
++ L EM G+ PNVV Y ALIGGYC+ G + K
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670
Score = 62.4 bits (150), Expect = 4e-08
Identities = 27/90 (30%), Positives = 52/90 (57%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M + P+ TY +++G C + M+ A L NE+ ++G++PD TY+ + +G+CK +
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGK 737
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGY 26
+EE + + M + G+ + + Y LI G+
Sbjct: 738 MEEALKVCDLMSTGGISLDDITYTTLIDGW 767
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/96 (32%), Positives = 48/96 (50%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ + KP+ L+ GLC K EA+ LW L +G + T + +I G C+A
Sbjct: 398 MLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGS 457
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
EE L EM+ G+ + + YN LI C++G +
Sbjct: 458 KEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493
>ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|222840912|gb|EEE78459.1|
predicted protein [Populus trichocarpa]
Length = 836
Score = 123 bits (308), Expect = 2e-26
Identities = 53/96 (55%), Positives = 75/96 (78%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV +G++PDI+T+N L+HGLC+ K++EA LW+E K+ G +P+V+TY VMIDGYCKA +
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+EEG NL +E+VS +E N V+YN+LI YC GN+
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657
Score = 82.4 bits (202), Expect = 3e-14
Identities = 37/96 (38%), Positives = 59/96 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M G+ P++ TYN ++HGLC +++EA ++ +E + P + TYSV I+G K ++
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
++E + EM G PN V+YN LI GYC+ GN+
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNI 377
Score = 79.3 bits (194), Expect = 3e-13
Identities = 35/91 (38%), Positives = 56/91 (61%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
++ +G P+I T NAL+HGLC M+E + L ++ GL+ D TY+ +I G CK +
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYC 23
++EG L EMV G++P++ +N L+ G C
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLC 582
Score = 78.6 bits (192), Expect = 5e-13
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 35/131 (26%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDV--------------- 161
M S+G+ TY++LMHGLC++ +++A L +E+++EGL+P+V
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQ 726
Query: 160 --------------------FTYSVMIDGYCKAKRLEEGVNLFHEMVSHGMEPNVVLYNA 41
FTY++MIDG+CK + +E L +EM G+ P+ V YNA
Sbjct: 727 MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNA 786
Query: 40 LIGGYCRQGNL 8
G C++G +
Sbjct: 787 FTNGLCKEGKV 797
Score = 75.1 bits (183), Expect = 6e-12
Identities = 32/96 (33%), Positives = 57/96 (59%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
MV + + P + TY+ ++GL + K++EA + E+ G +P+ Y+ +IDGYCK
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
+ E + + +M+S G+ PN V N+LI G+C+ +
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQI 412
Score = 71.6 bits (174), Expect = 6e-11
Identities = 33/96 (34%), Positives = 55/96 (57%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M+ + L+P+ L+ GLC K EAV LW L +G +P++ T + +I G CKA
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
++E + L +M+ G+ + + YN LI G C++G +
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552
Score = 68.9 bits (167), Expect = 4e-10
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+ +GL P + T L+ L +++++ +++ + G+IPDV +S MI+ +CK R
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNL 8
++ + LF +M G+ PNVV YN +I G C+ G L
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRL 307
Score = 66.2 bits (160), Expect = 3e-09
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M S + P+ FTY ++ G C + K +EA L NE+ +G++PD TY+ +G CK +
Sbjct: 737 MSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQ 17
+EE + EM S + + + Y LI G C Q
Sbjct: 797 VEEAFKVCDEMSSGAVCLDEITYTTLIDG-CHQ 828
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
+VS+ L+ + YN+L+ C M A L +++K G++ TYS ++ G C
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGL 691
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYCRQGNLPK 2
+++ +L EM G+ PNVV Y +IGGY + G + K
Sbjct: 692 VDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729
Score = 54.7 bits (130), Expect = 8e-06
Identities = 24/91 (26%), Positives = 49/91 (53%)
Frame = -3
Query: 295 MVSQGLKPDIFTYNALMHGLCSVCKMEEAVGLWNELKREGLIPDVFTYSVMIDGYCKAKR 116
M G P+ YN L+ G C + + EA+ + +++ +G+ P+ T + +I G+CK+ +
Sbjct: 352 MSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411
Query: 115 LEEGVNLFHEMVSHGMEPNVVLYNALIGGYC 23
+ + N+ EM+ G+ N ++ +I C
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLC 442