BLASTX nr result

ID: Coptis23_contig00033015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033015
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03715.1| predicted protein [Hordeum vulgare subsp. vulgare]    223   1e-56
emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera]   223   2e-56
ref|XP_002318714.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
dbj|BAJ98395.1| predicted protein [Hordeum vulgare subsp. vulgare]    221   5e-56
emb|CBI27578.3| unnamed protein product [Vitis vinifera]              221   5e-56

>dbj|BAK03715.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 243

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/119 (91%), Positives = 116/119 (97%)
 Frame = +3

Query: 3   PLGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGLKAKEAMDKGQLVSDDLVVGI 182
           P GSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLG+KAKEAMDKG+LVSDDLVVGI
Sbjct: 38  PPGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGI 97

Query: 183 IDDAMKKPSCRKGFILDGFPRTVAQAEKLDEMLARQGTKIDKVLNFAIDDAILEERITG 359
           ID+AMKKPSC+KGFILDGFPRTV QA+KLDEMLA+QG K+DKVLNFAIDDAILEERITG
Sbjct: 98  IDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLAKQGAKVDKVLNFAIDDAILEERITG 156


>emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera]
          Length = 2336

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/119 (91%), Positives = 116/119 (97%)
 Frame = +3

Query: 3    PLGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGLKAKEAMDKGQLVSDDLVVGI 182
            P GSGKGTQSP+IKDEYCLCHLATGDMLRAAVAAKTPLG+KAKEAMDKG+LV+DDLVVGI
Sbjct: 765  PPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVTDDLVVGI 824

Query: 183  IDDAMKKPSCRKGFILDGFPRTVAQAEKLDEMLARQGTKIDKVLNFAIDDAILEERITG 359
            ID+AMKKPSC+KGFILDGFPRTV QAEKLDEMLA+QG KIDKVLNFAIDDAILEERITG
Sbjct: 825  IDEAMKKPSCQKGFILDGFPRTVVQAEKLDEMLAKQGNKIDKVLNFAIDDAILEERITG 883


>ref|XP_002318714.1| predicted protein [Populus trichocarpa] gi|222859387|gb|EEE96934.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  222 bits (565), Expect = 3e-56
 Identities = 109/119 (91%), Positives = 115/119 (96%)
 Frame = +3

Query: 3   PLGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGLKAKEAMDKGQLVSDDLVVGI 182
           P GSGKGTQSP+IKDEYCLCHLATGDMLRAAVAAKTPLG+KAKEAMDKG+LVSDDLVVGI
Sbjct: 40  PPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGI 99

Query: 183 IDDAMKKPSCRKGFILDGFPRTVAQAEKLDEMLARQGTKIDKVLNFAIDDAILEERITG 359
           ID+AMKKPSC+KGFILDGFPRTV QAEKLDEML +QG KIDKVLNFAIDDAILEERITG
Sbjct: 100 IDEAMKKPSCQKGFILDGFPRTVVQAEKLDEMLQKQGAKIDKVLNFAIDDAILEERITG 158


>dbj|BAJ98395.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 241

 Score =  221 bits (563), Expect = 5e-56
 Identities = 108/119 (90%), Positives = 116/119 (97%)
 Frame = +3

Query: 3   PLGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGLKAKEAMDKGQLVSDDLVVGI 182
           P GSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLG+KAKEAM+KG+LVSDDLVVGI
Sbjct: 36  PPGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMNKGELVSDDLVVGI 95

Query: 183 IDDAMKKPSCRKGFILDGFPRTVAQAEKLDEMLARQGTKIDKVLNFAIDDAILEERITG 359
           ID+AMKKPSC+KGFILDGFPRTV QA+KLD+MLARQG K+DKVLNFAIDDAILEERITG
Sbjct: 96  IDEAMKKPSCQKGFILDGFPRTVVQAQKLDDMLARQGAKVDKVLNFAIDDAILEERITG 154


>emb|CBI27578.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  221 bits (563), Expect = 5e-56
 Identities = 108/119 (90%), Positives = 115/119 (96%)
 Frame = +3

Query: 3   PLGSGKGTQSPLIKDEYCLCHLATGDMLRAAVAAKTPLGLKAKEAMDKGQLVSDDLVVGI 182
           P GSGKGTQSP+IKDEYCLCHLATGDMLR AVAAKTPLG+KAKEAMDKG+LV+DDLVVGI
Sbjct: 96  PPGSGKGTQSPIIKDEYCLCHLATGDMLRVAVAAKTPLGIKAKEAMDKGELVTDDLVVGI 155

Query: 183 IDDAMKKPSCRKGFILDGFPRTVAQAEKLDEMLARQGTKIDKVLNFAIDDAILEERITG 359
           ID+AMKKPSC+KGFILDGFPRTV QAEKLDEMLA+QG KIDKVLNFAIDDAILEERITG
Sbjct: 156 IDEAMKKPSCQKGFILDGFPRTVVQAEKLDEMLAKQGNKIDKVLNFAIDDAILEERITG 214


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