BLASTX nr result

ID: Coptis23_contig00032500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032500
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331860.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
ref|XP_002272365.1| PREDICTED: uncharacterized protein LOC100258...    74   1e-11
ref|XP_002316744.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003629889.1| Rho guanine nucleotide exchange factor [Medi...    73   4e-11
ref|XP_003531274.1| PREDICTED: uncharacterized protein LOC100820...    72   7e-11

>ref|XP_002331860.1| predicted protein [Populus trichocarpa] gi|222875378|gb|EEF12509.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +2

Query: 2   EDCSRYGSENVNDNILVKAATVYGDARIHVEKEQEDLNKLLSSQV 136
           EDC RYG+EN+N+N+L KAA +YGDAR HVE+EQ+DLN+LLSSQV
Sbjct: 90  EDCCRYGTENINENMLAKAAAIYGDARKHVEQEQDDLNRLLSSQV 134


>ref|XP_002272365.1| PREDICTED: uncharacterized protein LOC100258967 [Vitis vinifera]
           gi|297740624|emb|CBI30806.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   EDCSRYGSENVNDNILVKAATVYGDARIHVEKEQEDLNKLLSSQV 136
           EDC RYG+EN+NDNIL +AA++YGD   H+ KEQEDLNKLLSSQ+
Sbjct: 90  EDCCRYGAENINDNILARAASIYGDGLKHIAKEQEDLNKLLSSQI 134


>ref|XP_002316744.1| predicted protein [Populus trichocarpa] gi|222859809|gb|EEE97356.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   EDCSRYGSENVNDNILVKAATVYGDARIHVEKEQEDLNKLLSSQV 136
           EDC RYG+EN+N+NIL KAA +YGDA  HVE+EQEDLN+LL SQ+
Sbjct: 90  EDCCRYGTENINENILAKAAAIYGDAHKHVEQEQEDLNRLLFSQI 134


>ref|XP_003629889.1| Rho guanine nucleotide exchange factor [Medicago truncatula]
           gi|355523911|gb|AET04365.1| Rho guanine nucleotide
           exchange factor [Medicago truncatula]
          Length = 348

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   EDCSRYGSENVNDNILVKAATVYGDARIHVEKEQEDLNKLLSSQV 136
           E+C RYG+EN +DNIL KAA+VYGDAR HVEKE E+LN+LLSSQV
Sbjct: 90  EECCRYGAENNSDNILAKAASVYGDARKHVEKEHEELNRLLSSQV 134


>ref|XP_003531274.1| PREDICTED: uncharacterized protein LOC100820088 [Glycine max]
          Length = 348

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   EDCSRYGSENVNDNILVKAATVYGDARIHVEKEQEDLNKLLSSQV 136
           EDC +YG+EN +DNIL KAA+VYGDAR HVEKE E+LN+LLS+QV
Sbjct: 90  EDCCKYGAENNSDNILAKAASVYGDARKHVEKEHEELNRLLSTQV 134


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