BLASTX nr result

ID: Coptis23_contig00032498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032498
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|222849573|gb|EEE87120.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = -2

Query: 184 MDLGCLDIGCITVLEKHKNDAAVVDLEKKDGDSENSPTFSYSSKFGKNKVSKGTGLSA 11
           MDLGCLD+GCI+VL+KH +D+ V+D   K+ DS      S  SK GKNK  KGTG SA
Sbjct: 1   MDLGCLDLGCISVLDKHSSDSFVLDPVNKECDSREK--VSSGSKIGKNKSPKGTGQSA 56


>ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|222846022|gb|EEE83569.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -2

Query: 187 SMDLGCLDIGCITVLEKHKNDAAVVDLEKKDGDSENSPTFSYSSKFGKNKVSKGTGLSAH 8
           SMD+GCLD+GCI+VL+K+        L+  D + ++S   S  SK GKNK  KGTG SA 
Sbjct: 5   SMDVGCLDLGCISVLDKNSGHTV---LDSVDKECDSSEKVSSGSKPGKNKSPKGTGQSAL 61

Query: 7   TA 2
            A
Sbjct: 62  NA 63


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