BLASTX nr result

ID: Coptis23_contig00032494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032494
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516192.1| Pectinesterase PPE8B precursor, putative [Ri...   233   2e-59
dbj|BAH56489.1| pectin methylesterase 1 [Prunus persica]              232   5e-59
ref|XP_002326320.1| predicted protein [Populus trichocarpa] gi|2...   227   1e-57
ref|XP_002273499.2| PREDICTED: uncharacterized protein LOC100257...   218   1e-54
ref|XP_002509939.1| enzyme inhibitor, putative [Ricinus communis...   188   7e-46

>ref|XP_002516192.1| Pectinesterase PPE8B precursor, putative [Ricinus communis]
           gi|223544678|gb|EEF46194.1| Pectinesterase PPE8B
           precursor, putative [Ricinus communis]
          Length = 543

 Score =  233 bits (594), Expect = 2e-59
 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
 Frame = +2

Query: 92  ALDTQLSSFRSVCKSTPYPDVCFDTLKLXXXXXXXXXXXXYVLQTLQLALSEAGKLSDLL 271
           +LDT LSS R+ C   PYPD CFD+LKL            Y+LQTLQ A+SEAGKL++L 
Sbjct: 36  SLDTHLSSLRNFCSGRPYPDACFDSLKLSISINISPNILNYILQTLQTAISEAGKLTNLF 95

Query: 272 YHVGSS-DIVERQRGTLQDCKELHQITVSSLQKSMSRISSGDTRKLSDANAFLSAALTNK 448
              GSS +I+++QRGT+QDCKELH+IT+SSL++S+SRI +GD++KL+DA A+LSAALTNK
Sbjct: 96  SSAGSSSNIIQKQRGTIQDCKELHEITLSSLKRSVSRIQAGDSQKLADARAYLSAALTNK 155

Query: 449 NTCLEGLDSATGPLKTTLVNSLVSTYKYVGNSLSMLSNSKPVKGHLNRRLMGFPTWITLK 628
           NTCLEGLDSA+GPLK  LVNS++STYK+V NS+SM+ +    KG  NRRL+GFP W++ K
Sbjct: 156 NTCLEGLDSASGPLKPVLVNSVISTYKHVSNSISMIPSPNSEKGQKNRRLLGFPKWLSKK 215

Query: 629 GRRILQN 649
            RRILQ+
Sbjct: 216 DRRILQS 222


>dbj|BAH56489.1| pectin methylesterase 1 [Prunus persica]
          Length = 543

 Score =  232 bits (591), Expect = 5e-59
 Identities = 116/182 (63%), Positives = 144/182 (79%), Gaps = 1/182 (0%)
 Frame = +2

Query: 107 LSSFRSVCKSTPYPDVCFDTLKLXXXXXXXXXXXXYVLQTLQLALSEAGKLSDLLYHVGS 286
           LSS RS CKSTPYPDVCFD+LKL            ++LQ+LQ+A+SEAGKLSDL Y  G 
Sbjct: 42  LSSIRSFCKSTPYPDVCFDSLKLSISINISPNIITFLLQSLQVAISEAGKLSDLFYKAGR 101

Query: 287 -SDIVERQRGTLQDCKELHQITVSSLQKSMSRISSGDTRKLSDANAFLSAALTNKNTCLE 463
            S+IVE+Q+G +QDCKELHQIT+SSLQ+S+SR+ +G+T+KL+DA A+LSAALTNKNTCLE
Sbjct: 102 YSNIVEKQKGAIQDCKELHQITLSSLQRSVSRVRAGNTKKLNDARAYLSAALTNKNTCLE 161

Query: 464 GLDSATGPLKTTLVNSLVSTYKYVGNSLSMLSNSKPVKGHLNRRLMGFPTWITLKGRRIL 643
           GLDSA+GP+K  LVNSL STYKYV NSLS++S     KG  NR L+  PTW++ K RRIL
Sbjct: 162 GLDSASGPMKPALVNSLTSTYKYVSNSLSVISKPGAPKGGTNRHLLAVPTWMSRKDRRIL 221

Query: 644 QN 649
           ++
Sbjct: 222 ES 223


>ref|XP_002326320.1| predicted protein [Populus trichocarpa] gi|222833513|gb|EEE71990.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  227 bits (579), Expect = 1e-57
 Identities = 117/189 (61%), Positives = 145/189 (76%), Gaps = 1/189 (0%)
 Frame = +2

Query: 92  ALDTQLSSFRSVCKSTPYPDVCFDTLKLXXXXXXXXXXXXYVLQTLQLALSEAGKLSDLL 271
           +LD  LS+ R+ C S PYPD CF++LKL             +LQTLQ A+SEAGKL++L 
Sbjct: 31  SLDAHLSTIRTFCNSRPYPDACFNSLKLSISINISPNIINLLLQTLQTAISEAGKLTNLF 90

Query: 272 YHVGSSDIVERQRGTLQDCKELHQITVSSLQKSMSRISSGDTRKLSDANAFLSAALTNKN 451
              G S+I+ERQRGT+QDC ELHQITVSSLQ+S+SR+ +GD+RKL DA A+LSAA+TNKN
Sbjct: 91  SIAGGSNIIERQRGTIQDCLELHQITVSSLQRSVSRVRAGDSRKLVDARAYLSAAVTNKN 150

Query: 452 TCLEGLDSATGPLKTTLVNSLVSTYKYVGNSLSMLSNSKPVK-GHLNRRLMGFPTWITLK 628
           TCLEGLDSA+GPLK  L+NSL STY++V NSLSML  SK  K G+ NRRL+GFP W++ K
Sbjct: 151 TCLEGLDSASGPLKPALLNSLTSTYQHVTNSLSMLPKSKHSKQGYKNRRLLGFPKWMSKK 210

Query: 629 GRRILQNLE 655
            RRILQ+ E
Sbjct: 211 DRRILQSDE 219


>ref|XP_002273499.2| PREDICTED: uncharacterized protein LOC100257766 [Vitis vinifera]
          Length = 1456

 Score =  218 bits (554), Expect = 1e-54
 Identities = 113/184 (61%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
 Frame = +2

Query: 101 TQLSSFRSVCKSTPYPDVCFDTLKLXXXXXXXXXXXXYVLQTLQLALSEAGKLSDLLYHV 280
           T L S  S CKSTPYPDVCF +LK+            ++L +LQ A+SEAGK+S LL   
Sbjct: 344 TSLKSVTSFCKSTPYPDVCFQSLKVHVSININPNIITFLLHSLQTAISEAGKVSTLLSTA 403

Query: 281 GS-SDIVERQRGTLQDCKELHQITVSSLQKSMSRISSGDTRKLSDANAFLSAALTNKNTC 457
           G  SD++E+QRGT+QDC+ELHQITVSSLQ+S+SR+ SGD++KL DA AFLSA+LTNK TC
Sbjct: 404 GQHSDVIEKQRGTIQDCRELHQITVSSLQRSVSRVRSGDSQKLKDARAFLSASLTNKVTC 463

Query: 458 LEGLDSATGPLKTTLVNSLVSTYKYVGNSLSMLSNSKPVKGHLNRRLMGFPTWITLKGRR 637
           LEGLDSA GP K TLVNS+V+ YK+V N LS+LS S P KG +NRRLMG P W +   RR
Sbjct: 464 LEGLDSAAGPSKPTLVNSIVAAYKHVSNCLSVLSKSTPQKGPINRRLMGAPAWAS---RR 520

Query: 638 ILQN 649
           ILQ+
Sbjct: 521 ILQS 524



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
 Frame = +2

Query: 113  SFRSVCKSTPYPDVCFDTLKLXXXXXXXXXXXXYVLQTLQLALSEAGKLSDLLYHVGSSD 292
            + +++C +T Y   C ++L                   L++A+S A   SD L       
Sbjct: 940  AIKTICSATDYKQTCENSLSKLSRSNSTLSQPK---DLLKVAISAA---SDGLQKAFGKT 993

Query: 293  IVER-----QRGTLQDCKELHQITVSSLQKSMSRISSGDTRKLS----DANAFLSAALTN 445
            +  +     ++   +DCK L Q     L+ S+S++S+ +  KLS    + N +LSA ++ 
Sbjct: 994  VTFKFDTPEEKDAYEDCKVLMQNAKEELEASISQVSASN--KLSSVTQELNNWLSAVMSY 1051

Query: 446  KNTCLEGLDSATGPLKTTLVNSLVSTYKYVGNSLSMLSNSKPVKGHL-----NRRLM--- 601
            + TC++G     GPLKT +  +  S  +   N+L+++S    +         NR L+   
Sbjct: 1052 QATCIDGFPE--GPLKTNMEKTFKSAKELTSNALAIVSKVTSILSSFDLTGANRHLLAQE 1109

Query: 602  ---------GFPTWITLKGRRILQNLE 655
                     G P W+T + RR+L+  E
Sbjct: 1110 SSGPSLANNGLPIWMTREDRRVLKPKE 1136


>ref|XP_002509939.1| enzyme inhibitor, putative [Ricinus communis]
           gi|223549838|gb|EEF51326.1| enzyme inhibitor, putative
           [Ricinus communis]
          Length = 428

 Score =  188 bits (478), Expect = 7e-46
 Identities = 104/188 (55%), Positives = 135/188 (71%), Gaps = 2/188 (1%)
 Frame = +2

Query: 92  ALDTQLSSFRSVCKSTPYPDVCFDTLKLXXXXXXXXXXXXYVLQTLQLALSEAGKLSDLL 271
           +LDT LSS R+ C +   PD CFD+LKL            Y+L +LQ A+S     ++L 
Sbjct: 31  SLDTHLSSLRNFCNN---PDACFDSLKLSISINIDAT---YLLHSLQTAIS-----TNLF 79

Query: 272 YHVG-SSDIVERQRGTLQDCKELHQITVSSLQK-SMSRISSGDTRKLSDANAFLSAALTN 445
              G S++++E+QRGT+Q+C++LHQIT SSLQ+ S+ RI +GD+RK +DA  +LSAALTN
Sbjct: 80  VSAGGSNNVIEKQRGTIQECQQLHQITSSSLQRISVPRIQAGDSRKQADARTYLSAALTN 139

Query: 446 KNTCLEGLDSATGPLKTTLVNSLVSTYKYVGNSLSMLSNSKPVKGHLNRRLMGFPTWITL 625
           KNTCL+GL SA+GPLKT LV+ L STY +V NSLSML    P KGH NRRL+GFPTWI+ 
Sbjct: 140 KNTCLDGLYSASGPLKTVLVDPLTSTYMHVSNSLSMLPKPVPRKGHKNRRLLGFPTWISK 199

Query: 626 KGRRILQN 649
           K RRILQ+
Sbjct: 200 KDRRILQS 207


Top