BLASTX nr result

ID: Coptis23_contig00032491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032491
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase A...   121   5e-26
emb|CBI37818.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putativ...   120   1e-25
ref|XP_003535761.1| PREDICTED: serine/threonine-protein kinase A...   113   2e-23

>ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase ATR-like [Vitis
           vinifera]
          Length = 2730

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/84 (75%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
 Frame = +2

Query: 5   LSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPSA--NEREVIAVLK 178
           LSSLVHELRERIAAS+S+     D+  LE RFR+VLPNLLH YV+PS+  NEREVIAVLK
Sbjct: 4   LSSLVHELRERIAASSSTPPNNGDDVVLETRFRAVLPNLLHTYVVPSSSENEREVIAVLK 63

Query: 179 LLSHTARNFPGVFYHGKANAVLPV 250
           LLSHT +NFPGVFYHGKA AVLP+
Sbjct: 64  LLSHTTKNFPGVFYHGKAGAVLPI 87


>emb|CBI37818.3| unnamed protein product [Vitis vinifera]
          Length = 2496

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/84 (75%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
 Frame = +2

Query: 5   LSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPSA--NEREVIAVLK 178
           LSSLVHELRERIAAS+S+     D+  LE RFR+VLPNLLH YV+PS+  NEREVIAVLK
Sbjct: 4   LSSLVHELRERIAASSSTPPNNGDDVVLETRFRAVLPNLLHTYVVPSSSENEREVIAVLK 63

Query: 179 LLSHTARNFPGVFYHGKANAVLPV 250
           LLSHT +NFPGVFYHGKA AVLP+
Sbjct: 64  LLSHTTKNFPGVFYHGKAGAVLPI 87


>ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|222848502|gb|EEE86049.1|
           predicted protein [Populus trichocarpa]
          Length = 2740

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 8/90 (8%)
 Frame = +2

Query: 5   LSSLVHELRERIAAS------TSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPS--ANERE 160
           LSSLVHELRERIAA+      T++N   E++  LEIRFR+VLPNLLHAYV+PS  A+ERE
Sbjct: 6   LSSLVHELRERIAATSSTPPNTNTNTAAENDSALEIRFRAVLPNLLHAYVVPSSSASERE 65

Query: 161 VIAVLKLLSHTARNFPGVFYHGKANAVLPV 250
           VIAVLKL+SH ARNFPGVFYHGK +A+LPV
Sbjct: 66  VIAVLKLISHIARNFPGVFYHGKGSAILPV 95


>ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putative [Ricinus communis]
           gi|223539506|gb|EEF41094.1| Serine/threonine-protein
           kinase ATR, putative [Ricinus communis]
          Length = 2822

 Score =  120 bits (300), Expect = 1e-25
 Identities = 62/84 (73%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
 Frame = +2

Query: 5   LSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLP--SANEREVIAVLK 178
           LSSL+HELRERIAAS+S+   T D++ L  RFR+VLPNLLH+YV+P  SA+EREVIAVLK
Sbjct: 5   LSSLIHELRERIAASSSTPPNTIDDDALGNRFRAVLPNLLHSYVVPSSSASEREVIAVLK 64

Query: 179 LLSHTARNFPGVFYHGKANAVLPV 250
           L+SH A+NFPGVFYHGKA+AVLPV
Sbjct: 65  LISHIAKNFPGVFYHGKASAVLPV 88


>ref|XP_003535761.1| PREDICTED: serine/threonine-protein kinase ATR-like [Glycine max]
          Length = 2738

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/88 (69%), Positives = 73/88 (82%), Gaps = 6/88 (6%)
 Frame = +2

Query: 5   LSSLVHELRERIAAS-TSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPSA----NEREVIA 169
           LSSLVHELR   A+S T S   T D++ LE+RFR+VLPNLLHAYVLPS+    NEREVIA
Sbjct: 6   LSSLVHELRIAAASSSTPSPNNTSDDDALEVRFRTVLPNLLHAYVLPSSSSSGNEREVIA 65

Query: 170 VLKLLSHTARNFPGVFYHGKA-NAVLPV 250
           V+KL+SHTARNFPGVFYHGKA +++LP+
Sbjct: 66  VVKLISHTARNFPGVFYHGKATSSILPI 93


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