BLASTX nr result

ID: Coptis23_contig00032488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032488
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281604.2| PREDICTED: probable LRR receptor-like serine...   227   3e-57
ref|XP_002514709.1| Brassinosteroid LRR receptor kinase precurso...   226   3e-57
ref|XP_002330132.1| predicted protein [Populus trichocarpa] gi|2...   210   2e-52
ref|XP_003550794.1| PREDICTED: probable LRR receptor-like serine...   205   8e-51
ref|NP_565084.1| putative LRR receptor-like serine/threonine-pro...   205   1e-50

>ref|XP_002281604.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g74360-like [Vitis vinifera]
          Length = 1101

 Score =  227 bits (578), Expect = 3e-57
 Identities = 110/200 (55%), Positives = 147/200 (73%), Gaps = 1/200 (0%)
 Frame = +1

Query: 184 MSEGERDFRGFYAVMFFLLITGQVVSGNTPETDREVLLQLKSFLLSQNKVNRGRYVRWGD 363
           M + E D R    ++  +LITG++V+G++ ETDREVLL LK FL   N+VNRGRY  W  
Sbjct: 1   MRDEETDIRVVGLMISLVLITGRIVAGDSLETDREVLLSLKKFLEDNNQVNRGRYQEWNL 60

Query: 364 TNSNPCNWPDIICNNE-RVTRIYLSNCNMSGNMFGNFSALTELTDLDLSANTIGGVIPDD 540
           ++ NPC+WP I+C+N+ RV  + LS+ ++SG +F NFSALT+L+ LDLS NT+GG IP D
Sbjct: 61  SSWNPCDWPGILCSNDGRVISVNLSDNSISGEIFHNFSALTKLSHLDLSKNTLGGRIPAD 120

Query: 541 LNGCSKLKHLNLSHNILEGEFNLTGLNSLEALDLTVNRLVGEVQLSFPAMCQNLIRLNIS 720
           L  C  L +LNLSHNI+  E NLTGL SLE LDL++NR+ GE+QL+FPA+C  L+  NIS
Sbjct: 121 LRRCESLVYLNLSHNIINDELNLTGLKSLEVLDLSINRIGGEIQLTFPAVCDRLVLANIS 180

Query: 721 SNRFKGKIDNCFNDCPALQY 780
            N F G IDNCF++C +L+Y
Sbjct: 181 ENNFTGSIDNCFDECKSLKY 200



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = +1

Query: 415 VTRIYLSNCNMSGNMFGNFSALTELTDLDLSANTIGGVIPDDLNGCSKLKHLNLSHNILE 594
           ++R+ LS  N SG +    S +  L  L L+ N   G IP +     +L+ L+LS N L 
Sbjct: 365 ISRLDLSFNNFSGPLPVELSEMPSLEFLILAHNQFSGSIPPEFGNIRRLQALDLSFNSLN 424

Query: 595 GEFNLT--GLNSLEALDLTVNRLVGEVQLSFPAMCQNLIRLNISSNRFKGKI 744
           G    T   LNSL  L L  NR  GE+       C +L+ LN+++N+F GKI
Sbjct: 425 GSIPSTIGKLNSLLWLMLANNRFSGEIPPEI-GNCTSLLWLNLANNQFSGKI 475


>ref|XP_002514709.1| Brassinosteroid LRR receptor kinase precursor, putative [Ricinus
           communis] gi|223546313|gb|EEF47815.1| Brassinosteroid
           LRR receptor kinase precursor, putative [Ricinus
           communis]
          Length = 1099

 Score =  226 bits (577), Expect = 3e-57
 Identities = 111/201 (55%), Positives = 145/201 (72%), Gaps = 2/201 (0%)
 Frame = +1

Query: 184 MSEGERDFRGFYAVMFFLLITGQVVSGNTPETDREVLLQLKSFLLSQNKVNRGRYVRWGD 363
           M E E D  G    +F +LI G VV+G++ +TDREVLL LKSFL  +N+VNRG+Y +WG 
Sbjct: 1   MPEEEADLWGVVLFIFLILIAGVVVAGDSLDTDREVLLNLKSFLEEKNQVNRGQYTQWGQ 60

Query: 364 TNSNPCNWPDIICNNE--RVTRIYLSNCNMSGNMFGNFSALTELTDLDLSANTIGGVIPD 537
            + NPCNW  I+C+ +  RVT + L   N+SG ++ NFS+LT L+ LDLS N IGGVI +
Sbjct: 61  FSKNPCNWSGIMCSEDGSRVTGVKLIGNNISGLLYNNFSSLTALSYLDLSQNYIGGVINN 120

Query: 538 DLNGCSKLKHLNLSHNILEGEFNLTGLNSLEALDLTVNRLVGEVQLSFPAMCQNLIRLNI 717
           DL+ C  L HLNLSHN+LEGE NLTGL++L+ LDL++NR  G +Q SFPA+C  L+  NI
Sbjct: 121 DLSNCQNLAHLNLSHNMLEGELNLTGLSNLQILDLSLNRFFGGIQYSFPAICNKLVVANI 180

Query: 718 SSNRFKGKIDNCFNDCPALQY 780
           S N F G+IDNCF+ C +LQY
Sbjct: 181 SGNNFTGRIDNCFDGCLSLQY 201


>ref|XP_002330132.1| predicted protein [Populus trichocarpa] gi|222871266|gb|EEF08397.1|
           predicted protein [Populus trichocarpa]
          Length = 1067

 Score =  210 bits (535), Expect = 2e-52
 Identities = 103/178 (57%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
 Frame = +1

Query: 253 VVSGNTPETDREVLLQLKSFLLSQNKVNRGRYVRWGDTNSNPCNWPDIIC--NNERVTRI 426
           VVSG++ +TDR+VLL LKSFL  +N VNRG+Y +W   +SNPCNW  I+C  +  RV  I
Sbjct: 7   VVSGDSLDTDRQVLLGLKSFLEERNHVNRGQYSQWNQQSSNPCNWSGILCTLDGSRVRGI 66

Query: 427 YLSNCNMSGNMFGNFSALTELTDLDLSANTIGGVIPDDLNGCSKLKHLNLSHNILEGEFN 606
            L+  N+SG+++GNFS+LT LT LDLS NT+GG +P DL+ C  L +LNLSHNILEGE N
Sbjct: 67  NLAVNNISGDLYGNFSSLTALTYLDLSQNTLGGAVPGDLSNCQNLVYLNLSHNILEGELN 126

Query: 607 LTGLNSLEALDLTVNRLVGEVQLSFPAMCQNLIRLNISSNRFKGKIDNCFNDCPALQY 780
           LTGL  LE LDL+ NR+ G +Q SFP +C NLI  N+S+N F G IDN F+ C  LQY
Sbjct: 127 LTGLTKLETLDLSTNRIFGGIQFSFPGICNNLIVANVSANNFSGGIDNFFDGCLKLQY 184


>ref|XP_003550794.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g74360-like [Glycine max]
          Length = 1091

 Score =  205 bits (522), Expect = 8e-51
 Identities = 103/200 (51%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
 Frame = +1

Query: 184 MSEGERDFRGFYAVMFFLLITGQVVSGNTPETDREVLLQLKSFLLSQNKVNRGRYVRWGD 363
           MSE E D  G     F +L++G+V  G + + D+EVLL+LK +L S+   +RG Y+ W  
Sbjct: 1   MSEQETDSCGLLLFFFLILLSGKVAVGESLDKDKEVLLKLKFYLDSKILADRGGYIYWNA 60

Query: 364 TNSNPCNWPDIICN-NERVTRIYLSNCNMSGNMFGNFSALTELTDLDLSANTIGGVIPDD 540
            +SNPC W  I C+  +RV  I LSN +++G +F NFS LTELT LDLS NT+ G IP+D
Sbjct: 61  NSSNPCEWKGISCSATKRVVGIELSNSDITGEIFMNFSQLTELTHLDLSQNTLSGEIPED 120

Query: 541 LNGCSKLKHLNLSHNILEGEFNLTGLNSLEALDLTVNRLVGEVQLSFPAMCQNLIRLNIS 720
           L  C KL HLNLSHNILEGE NLTGL  L  LDL+ NR  G++ L+FP++C NL+  N+S
Sbjct: 121 LRHCHKLVHLNLSHNILEGELNLTGLIGLRTLDLSNNRFYGDIGLNFPSICANLVVANVS 180

Query: 721 SNRFKGKIDNCFNDCPALQY 780
            N+  G I+NCF+ C  LQY
Sbjct: 181 GNKLTGVIENCFDQCLKLQY 200


>ref|NP_565084.1| putative LRR receptor-like serine/threonine-protein kinase
           [Arabidopsis thaliana]
           gi|264664459|sp|C0LGJ1.1|Y1743_ARATH RecName:
           Full=Probable LRR receptor-like serine/threonine-protein
           kinase At1g74360; Flags: Precursor
           gi|224589485|gb|ACN59276.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332197461|gb|AEE35582.1| putative LRR receptor-like
           serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 1106

 Score =  205 bits (521), Expect = 1e-50
 Identities = 106/203 (52%), Positives = 139/203 (68%), Gaps = 3/203 (1%)
 Frame = +1

Query: 181 IMSEGERDFRGFYAVMFFLLITGQVVSGNTPETDREVLLQLKSFLLSQNKVNRGRYVRWG 360
           IM++ +     F   + F  IT   V+G++ ++DREVLL LKS+L S+N  NRG Y  W 
Sbjct: 8   IMTDDDSQSLCFLCFLLFFFITAIAVAGDSLDSDREVLLSLKSYLESRNPQNRGLYTEWK 67

Query: 361 DTNSNP-CNWPDIICNNER--VTRIYLSNCNMSGNMFGNFSALTELTDLDLSANTIGGVI 531
             N +  C WP IIC  +R  VT I L++  +SG +F NFSALTELT LDLS NTI G I
Sbjct: 68  MENQDVVCQWPGIICTPQRSRVTGINLTDSTISGPLFKNFSALTELTYLDLSRNTIEGEI 127

Query: 532 PDDLNGCSKLKHLNLSHNILEGEFNLTGLNSLEALDLTVNRLVGEVQLSFPAMCQNLIRL 711
           PDDL+ C  LKHLNLSHNILEGE +L GL++LE LDL++NR+ G++Q SFP  C +L+  
Sbjct: 128 PDDLSRCHNLKHLNLSHNILEGELSLPGLSNLEVLDLSLNRITGDIQSSFPLFCNSLVVA 187

Query: 712 NISSNRFKGKIDNCFNDCPALQY 780
           N+S+N F G+ID+ FN C  L+Y
Sbjct: 188 NLSTNNFTGRIDDIFNGCRNLKY 210


Top