BLASTX nr result
ID: Coptis23_contig00032471
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00032471 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515299.1| conserved hypothetical protein [Ricinus comm... 99 4e-19 ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258... 99 5e-19 ref|XP_003591419.1| Multidrug resistance protein ABC transporter... 97 2e-18 ref|XP_002301506.1| multidrug resistance protein ABC transporter... 94 1e-17 gb|AFK39923.1| unknown [Lotus japonicus] 89 4e-16 >ref|XP_002515299.1| conserved hypothetical protein [Ricinus communis] gi|223545779|gb|EEF47283.1| conserved hypothetical protein [Ricinus communis] Length = 191 Score = 99.0 bits (245), Expect = 4e-19 Identities = 47/78 (60%), Positives = 61/78 (78%) Frame = +3 Query: 9 MGNYISNRKLNPGGKVILSDSRVHEFNEPVTAAELMLEHPQQVVVEFKSLFAGKKPIPLP 188 MGNYI++R N GKVIL D VH F++ +T AELMLE+PQQVVVEF+ + K+P PLP Sbjct: 1 MGNYITSRSSNATGKVILPDGTVHAFDKSLTVAELMLEYPQQVVVEFQQNLSEKRPAPLP 60 Query: 189 ADKKLDTEKIYVMLHMKR 242 ADKKL+ +K+Y++L MKR Sbjct: 61 ADKKLEAKKVYLILPMKR 78 >ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258949 [Vitis vinifera] Length = 196 Score = 98.6 bits (244), Expect = 5e-19 Identities = 50/80 (62%), Positives = 59/80 (73%), Gaps = 2/80 (2%) Frame = +3 Query: 9 MGNYISNRKLNPGGKVILSDSRVHEFNEPVTAAELMLEHPQQVVVEFKS--LFAGKKPIP 182 MGNY+S R + GK++LSD VHEF +PVT AELMLEHPQQVVVE S GK+P P Sbjct: 1 MGNYVSFRSCSAAGKIVLSDGSVHEFIKPVTVAELMLEHPQQVVVELNSGKGSGGKRPSP 60 Query: 183 LPADKKLDTEKIYVMLHMKR 242 LPAD KL+ K+Y+ML MKR Sbjct: 61 LPADMKLEMGKVYLMLPMKR 80 >ref|XP_003591419.1| Multidrug resistance protein ABC transporter family protein [Medicago truncatula] gi|355480467|gb|AES61670.1| Multidrug resistance protein ABC transporter family protein [Medicago truncatula] Length = 192 Score = 96.7 bits (239), Expect = 2e-18 Identities = 46/78 (58%), Positives = 58/78 (74%) Frame = +3 Query: 9 MGNYISNRKLNPGGKVILSDSRVHEFNEPVTAAELMLEHPQQVVVEFKSLFAGKKPIPLP 188 MGN +S R +P GKV+ D VHEF+E +T AELM++HPQ+VVVEF S K+P PLP Sbjct: 1 MGNQVSFRPSDPTGKVVFLDGSVHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLP 60 Query: 189 ADKKLDTEKIYVMLHMKR 242 ADKKLD KIY+ML +K+ Sbjct: 61 ADKKLDMNKIYLMLPVKQ 78 >ref|XP_002301506.1| multidrug resistance protein ABC transporter family protein [Populus trichocarpa] gi|222843232|gb|EEE80779.1| multidrug resistance protein ABC transporter family protein [Populus trichocarpa] Length = 197 Score = 93.6 bits (231), Expect = 1e-17 Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 4/82 (4%) Frame = +3 Query: 9 MGNYI----SNRKLNPGGKVILSDSRVHEFNEPVTAAELMLEHPQQVVVEFKSLFAGKKP 176 MGNYI S+ G+VIL D +V EF+ P+TAAELMLE+PQQVVVEF S F K+P Sbjct: 1 MGNYITFPNSSNSAAGTGRVILWDGKVFEFDTPLTAAELMLEYPQQVVVEFHSDFTEKRP 60 Query: 177 IPLPADKKLDTEKIYVMLHMKR 242 PLPADK+LD +K+Y+ML +KR Sbjct: 61 APLPADKRLDLKKVYLMLPIKR 82 >gb|AFK39923.1| unknown [Lotus japonicus] Length = 196 Score = 89.0 bits (219), Expect = 4e-16 Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 2/80 (2%) Frame = +3 Query: 9 MGNYISNRKLNPG-GKVILSDSRVHEFNEPVTAAELMLEHPQQVVVEFKS-LFAGKKPIP 182 MGN+IS+ + GK++ D V EF++P+T AELMLEHPQQVVVEF S L K+P P Sbjct: 1 MGNHISSFPASDATGKIVYCDGSVQEFDQPLTVAELMLEHPQQVVVEFHSALNHQKRPTP 60 Query: 183 LPADKKLDTEKIYVMLHMKR 242 LPADKKL+ +K YVML MKR Sbjct: 61 LPADKKLEMKKTYVMLPMKR 80