BLASTX nr result

ID: Coptis23_contig00032459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032459
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin...   119   3e-25
ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin...   119   3e-25
ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch...   117   7e-25
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...   115   4e-24
ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...   115   4e-24

>ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max]
           gi|255640572|gb|ACU20571.1| unknown [Glycine max]
          Length = 143

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = +2

Query: 2   EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181
           EKNMLMTQRQMLN QNL+FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRSAEMKRMIN
Sbjct: 82  EKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMIN 141

Query: 182 A 184
           A
Sbjct: 142 A 142


>ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max]
           gi|255629706|gb|ACU15202.1| unknown [Glycine max]
          Length = 142

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = +2

Query: 2   EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181
           EKNMLMTQRQMLN QNL+FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRSAEMKRMIN
Sbjct: 81  EKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMIN 140

Query: 182 A 184
           A
Sbjct: 141 A 141


>ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis
           sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S
           ribosomal protein L47, mitochondrial-like [Cucumis
           sativus]
          Length = 143

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = +2

Query: 2   EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181
           EKNMLMTQRQMLN QNL+FPNPERIPKVRKSMCRIKHVLTERAI+EPD RRSAEMKRMIN
Sbjct: 82  EKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMIN 141

Query: 182 A 184
           A
Sbjct: 142 A 142


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/61 (90%), Positives = 59/61 (96%)
 Frame = +2

Query: 2   EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181
           EKNMLMTQRQML+ QN +FPNPER+PKVRKSMCRIKHVLTERAIEEPD+RRSAEMKRMIN
Sbjct: 81  EKNMLMTQRQMLHAQNFRFPNPERLPKVRKSMCRIKHVLTERAIEEPDSRRSAEMKRMIN 140

Query: 182 A 184
           A
Sbjct: 141 A 141


>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +2

Query: 2   EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181
           EKNMLMTQRQML +QNL+FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRS EMKRMIN
Sbjct: 79  EKNMLMTQRQMLQSQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSVEMKRMIN 138

Query: 182 A 184
           A
Sbjct: 139 A 139


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