BLASTX nr result
ID: Coptis23_contig00032459
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00032459 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin... 119 3e-25 ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin... 119 3e-25 ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch... 117 7e-25 ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1... 115 4e-24 ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch... 115 4e-24 >ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max] gi|255640572|gb|ACU20571.1| unknown [Glycine max] Length = 143 Score = 119 bits (297), Expect = 3e-25 Identities = 58/61 (95%), Positives = 59/61 (96%) Frame = +2 Query: 2 EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181 EKNMLMTQRQMLN QNL+FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRSAEMKRMIN Sbjct: 82 EKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMIN 141 Query: 182 A 184 A Sbjct: 142 A 142 >ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max] gi|255629706|gb|ACU15202.1| unknown [Glycine max] Length = 142 Score = 119 bits (297), Expect = 3e-25 Identities = 58/61 (95%), Positives = 59/61 (96%) Frame = +2 Query: 2 EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181 EKNMLMTQRQMLN QNL+FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRSAEMKRMIN Sbjct: 81 EKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMIN 140 Query: 182 A 184 A Sbjct: 141 A 141 >ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis sativus] Length = 143 Score = 117 bits (294), Expect = 7e-25 Identities = 57/61 (93%), Positives = 59/61 (96%) Frame = +2 Query: 2 EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181 EKNMLMTQRQMLN QNL+FPNPERIPKVRKSMCRIKHVLTERAI+EPD RRSAEMKRMIN Sbjct: 82 EKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMIN 141 Query: 182 A 184 A Sbjct: 142 A 142 >ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1| unknown [Populus trichocarpa] gi|222861024|gb|EEE98566.1| predicted protein [Populus trichocarpa] Length = 142 Score = 115 bits (288), Expect = 4e-24 Identities = 55/61 (90%), Positives = 59/61 (96%) Frame = +2 Query: 2 EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181 EKNMLMTQRQML+ QN +FPNPER+PKVRKSMCRIKHVLTERAIEEPD+RRSAEMKRMIN Sbjct: 81 EKNMLMTQRQMLHAQNFRFPNPERLPKVRKSMCRIKHVLTERAIEEPDSRRSAEMKRMIN 140 Query: 182 A 184 A Sbjct: 141 A 141 >ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1 [Vitis vinifera] gi|225457112|ref|XP_002283459.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3| unnamed protein product [Vitis vinifera] Length = 140 Score = 115 bits (288), Expect = 4e-24 Identities = 56/61 (91%), Positives = 58/61 (95%) Frame = +2 Query: 2 EKNMLMTQRQMLNTQNLQFPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKRMIN 181 EKNMLMTQRQML +QNL+FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRS EMKRMIN Sbjct: 79 EKNMLMTQRQMLQSQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSVEMKRMIN 138 Query: 182 A 184 A Sbjct: 139 A 139