BLASTX nr result

ID: Coptis23_contig00032442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032442
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002278121.2| PREDICTED: LOB domain-containing protein 12-...    71   1e-10
emb|CAN68873.1| hypothetical protein VITISV_026576 [Vitis vinifera]    71   1e-10
ref|XP_003551217.1| PREDICTED: LOB domain-containing protein 12-...    56   3e-06

>ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|222845757|gb|EEE83304.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/60 (73%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = -2

Query: 271 CIQMQQEPALPTHSQMDQDERSLLLHS--NLDSIPQYLNFTSYPSSNVIQDPPKRESLWT 98
           CIQMQQEP LPT  Q+DQD++SLLL S  N +SIPQY NF S  SSNVIQDP KRESLWT
Sbjct: 108 CIQMQQEPNLPT--QLDQDDKSLLLASCNNFNSIPQYFNFAS--SSNVIQDPLKRESLWT 163


>ref|XP_002278121.2| PREDICTED: LOB domain-containing protein 12-like [Vitis vinifera]
           gi|297745838|emb|CBI15894.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = -2

Query: 271 CIQMQQE-PALPTHSQMDQDERSLLLHSN-LDSIPQYLNFTSYPSSNVIQDPPKRESLWT 98
           CIQMQQE PALPT  QMDQDE+SLLL +N  +++  YL+F S  SSNVIQDP KRESLWT
Sbjct: 108 CIQMQQEEPALPT--QMDQDEKSLLLSNNSFNNLQHYLSFAS--SSNVIQDPLKRESLWT 163


>emb|CAN68873.1| hypothetical protein VITISV_026576 [Vitis vinifera]
          Length = 163

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = -2

Query: 271 CIQMQQE-PALPTHSQMDQDERSLLLHSN-LDSIPQYLNFTSYPSSNVIQDPPKRESLWT 98
           CIQMQQE PALPT  QMDQDE+SLLL +N  +++  YL+F S  SSNVIQDP KRESLWT
Sbjct: 108 CIQMQQEEPALPT--QMDQDEKSLLLSNNSFNNLQHYLSFAS--SSNVIQDPLKRESLWT 163


>ref|XP_003551217.1| PREDICTED: LOB domain-containing protein 12-like [Glycine max]
          Length = 172

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 8/66 (12%)
 Frame = -2

Query: 271 CIQMQQ-EPALPTHSQMDQDERSLLL--HSNLDSIPQYLNF--TSYPSSNVIQDPP---K 116
           CIQMQQ EP L T   +DQD++S+LL  ++N + +PQ+LNF  +S  SSN+ QDP    K
Sbjct: 108 CIQMQQQEPTLATQL-VDQDDKSMLLSVNNNYEMLPQFLNFPSSSSSSSNIFQDPHEPLK 166

Query: 115 RESLWT 98
           RES WT
Sbjct: 167 RESFWT 172


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