BLASTX nr result
ID: Coptis23_contig00032442
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00032442 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 ref|XP_002278121.2| PREDICTED: LOB domain-containing protein 12-... 71 1e-10 emb|CAN68873.1| hypothetical protein VITISV_026576 [Vitis vinifera] 71 1e-10 ref|XP_003551217.1| PREDICTED: LOB domain-containing protein 12-... 56 3e-06 >ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|222845757|gb|EEE83304.1| predicted protein [Populus trichocarpa] Length = 163 Score = 78.6 bits (192), Expect = 5e-13 Identities = 44/60 (73%), Positives = 48/60 (80%), Gaps = 2/60 (3%) Frame = -2 Query: 271 CIQMQQEPALPTHSQMDQDERSLLLHS--NLDSIPQYLNFTSYPSSNVIQDPPKRESLWT 98 CIQMQQEP LPT Q+DQD++SLLL S N +SIPQY NF S SSNVIQDP KRESLWT Sbjct: 108 CIQMQQEPNLPT--QLDQDDKSLLLASCNNFNSIPQYFNFAS--SSNVIQDPLKRESLWT 163 >ref|XP_002278121.2| PREDICTED: LOB domain-containing protein 12-like [Vitis vinifera] gi|297745838|emb|CBI15894.3| unnamed protein product [Vitis vinifera] Length = 163 Score = 70.9 bits (172), Expect = 1e-10 Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 2/60 (3%) Frame = -2 Query: 271 CIQMQQE-PALPTHSQMDQDERSLLLHSN-LDSIPQYLNFTSYPSSNVIQDPPKRESLWT 98 CIQMQQE PALPT QMDQDE+SLLL +N +++ YL+F S SSNVIQDP KRESLWT Sbjct: 108 CIQMQQEEPALPT--QMDQDEKSLLLSNNSFNNLQHYLSFAS--SSNVIQDPLKRESLWT 163 >emb|CAN68873.1| hypothetical protein VITISV_026576 [Vitis vinifera] Length = 163 Score = 70.9 bits (172), Expect = 1e-10 Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 2/60 (3%) Frame = -2 Query: 271 CIQMQQE-PALPTHSQMDQDERSLLLHSN-LDSIPQYLNFTSYPSSNVIQDPPKRESLWT 98 CIQMQQE PALPT QMDQDE+SLLL +N +++ YL+F S SSNVIQDP KRESLWT Sbjct: 108 CIQMQQEEPALPT--QMDQDEKSLLLSNNSFNNLQHYLSFAS--SSNVIQDPLKRESLWT 163 >ref|XP_003551217.1| PREDICTED: LOB domain-containing protein 12-like [Glycine max] Length = 172 Score = 56.2 bits (134), Expect = 3e-06 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 8/66 (12%) Frame = -2 Query: 271 CIQMQQ-EPALPTHSQMDQDERSLLL--HSNLDSIPQYLNF--TSYPSSNVIQDPP---K 116 CIQMQQ EP L T +DQD++S+LL ++N + +PQ+LNF +S SSN+ QDP K Sbjct: 108 CIQMQQQEPTLATQL-VDQDDKSMLLSVNNNYEMLPQFLNFPSSSSSSSNIFQDPHEPLK 166 Query: 115 RESLWT 98 RES WT Sbjct: 167 RESFWT 172