BLASTX nr result

ID: Coptis23_contig00032439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032439
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   256   3e-66
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              256   3e-66
gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbo...   240   2e-61
gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbo...   240   2e-61
ref|XP_003537666.1| PREDICTED: uncharacterized protein LOC100817...   231   9e-59

>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  256 bits (653), Expect = 3e-66
 Identities = 127/196 (64%), Positives = 143/196 (72%), Gaps = 4/196 (2%)
 Frame = +2

Query: 80  MNSTSAATGMAMTGYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSA 259
           +   S ATGM +     PFT SQWQELEHQALIFKYLMAGLPVPPDLV+PI+KSFESMS+
Sbjct: 8   VGGASMATGMMVRS--SPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSS 65

Query: 260 RFFHHPSMGYCSFYGKKADPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKP 439
           RFFHHP+MGYCSFYGKK DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKP
Sbjct: 66  RFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKP 125

Query: 440 VEXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQNLPI---HNPQG-LCVGSNQSHLQMDPV 607
           VE                            +QNLP+   +NPQG    G+NQS   M+P+
Sbjct: 126 VESQTTTQSSSTVTSLTVTGGSGSGAGT--FQNLPLQNFNNPQGGPGSGTNQSQFHMEPI 183

Query: 608 SYGMASKEYRYLQGMK 655
            YG+ +K+YRYL G+K
Sbjct: 184 PYGIPNKDYRYLHGLK 199


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  256 bits (653), Expect = 3e-66
 Identities = 127/196 (64%), Positives = 143/196 (72%), Gaps = 4/196 (2%)
 Frame = +2

Query: 80  MNSTSAATGMAMTGYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSA 259
           +   S ATGM +     PFT SQWQELEHQALIFKYLMAGLPVPPDLV+PI+KSFESMS+
Sbjct: 51  VGGASMATGMMVRS--SPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSS 108

Query: 260 RFFHHPSMGYCSFYGKKADPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKP 439
           RFFHHP+MGYCSFYGKK DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKP
Sbjct: 109 RFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKP 168

Query: 440 VEXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQNLPI---HNPQG-LCVGSNQSHLQMDPV 607
           VE                            +QNLP+   +NPQG    G+NQS   M+P+
Sbjct: 169 VESQTTTQSSSTVTSLTVTGGSGSGAGT--FQNLPLQNFNNPQGGPGSGTNQSQFHMEPI 226

Query: 608 SYGMASKEYRYLQGMK 655
            YG+ +K+YRYL G+K
Sbjct: 227 PYGIPNKDYRYLHGLK 242


>gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbocastanum]
          Length = 445

 Score =  240 bits (612), Expect = 2e-61
 Identities = 114/181 (62%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
 Frame = +2

Query: 119 GYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSARFFHHPSMGYCSF 298
           GYRPPFTA QWQELEHQA+I+KYL+AGLPVPPDLV+PI++SFE++SARFFHHPS+GYCS+
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 299 YGKKADPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE-----XXXXXX 463
           YGKK DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE           
Sbjct: 86  YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQSTSQSLSTS 145

Query: 464 XXXXXXXXXXXXXXXXXXXXXXYQNLPIH---NPQGLCVGSNQSHLQMDPVSYGMASKEY 634
                                 +QN+P++   N   L  GS  + LQM+P SYG+ +K+Y
Sbjct: 146 MSQITTGSSNTKERFQNSSSGTFQNMPLYSVANSGTLNYGSTATKLQMEPASYGIDNKDY 205

Query: 635 R 637
           R
Sbjct: 206 R 206


>gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbocastanum]
          Length = 552

 Score =  240 bits (612), Expect = 2e-61
 Identities = 114/181 (62%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
 Frame = +2

Query: 119 GYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSARFFHHPSMGYCSF 298
           GYRPPFTA QWQELEHQA+I+KYL+AGLPVPPDLV+PI++SFE++SARFFHHPS+GYCS+
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 299 YGKKADPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE-----XXXXXX 463
           YGKK DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE           
Sbjct: 86  YGKKFDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQSTSQSLSTS 145

Query: 464 XXXXXXXXXXXXXXXXXXXXXXYQNLPIH---NPQGLCVGSNQSHLQMDPVSYGMASKEY 634
                                 +QN+P++   N   L  GS  + LQM+P SYG+ +K+Y
Sbjct: 146 MSQITTGSSNTKGSFQNSSSRTFQNMPLYSVANSGTLNYGSTATKLQMEPASYGIDNKDY 205

Query: 635 R 637
           R
Sbjct: 206 R 206


>ref|XP_003537666.1| PREDICTED: uncharacterized protein LOC100817313 [Glycine max]
          Length = 308

 Score =  231 bits (589), Expect = 9e-59
 Identities = 114/181 (62%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
 Frame = +2

Query: 131 PFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSARFFHHPS--MGYCSFYG 304
           PFT SQWQELEHQALI+KY++AGLPVPPDLVIPI+ SF S+S  F HHPS  M YCSFYG
Sbjct: 5   PFTISQWQELEHQALIYKYMVAGLPVPPDLVIPIQNSFHSISQTFLHHPSTTMSYCSFYG 64

Query: 305 KKADPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVEXXXXXXXXXXXXX 484
           KK DPEPGRCRRTDGKKWRCSK+AYPDSKYCERHMHRGRNRSRKPVE             
Sbjct: 65  KKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE-SQTMTQSSSNVS 123

Query: 485 XXXXXXXXXXXXXXXYQNL----PIHNPQGLCVGSNQSHLQMDPVSYGMASKEYRYLQGM 652
                          +QNL       NPQG   G++Q+H  MD + YG+ SKEYRY QG 
Sbjct: 124 SLTVTAGSSTSATGNFQNLSTTNAYGNPQGTASGTDQTHYHMDSIPYGIPSKEYRYFQGS 183

Query: 653 K 655
           K
Sbjct: 184 K 184


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