BLASTX nr result

ID: Coptis23_contig00032419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032419
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29334.3| unnamed protein product [Vitis vinifera]               77   2e-26
ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-conta...    77   2e-26
ref|XP_002527120.1| Protein ABC1, mitochondrial precursor, putat...    77   6e-26
ref|XP_003548083.1| PREDICTED: uncharacterized aarF domain-conta...    72   2e-25
ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-24

>emb|CBI29334.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 77.4 bits (189), Expect(2) = 2e-26
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 386 YPWIARKVLTDNSPKLRSSLQALLYKEGVFRVDLLESLLSE 264
           YPWIARKVLTD+SPKL+SSLQALLYKEGVFR+D LESLLSE
Sbjct: 489 YPWIARKVLTDSSPKLKSSLQALLYKEGVFRIDRLESLLSE 529



 Score = 66.6 bits (161), Expect(2) = 2e-26
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -1

Query: 148 DSRLVIKQTLTFILTEKGTFVREILLQELAKGFDALGLATTSAAIS 11
           DSRLV+KQ L+F LTEKGTFVRE+LL+E AKG DALGLAT  +  S
Sbjct: 548 DSRLVVKQILSFTLTEKGTFVREMLLEEFAKGLDALGLATLDSITS 593


>ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At1g71810, chloroplastic-like [Vitis vinifera]
          Length = 713

 Score = 77.4 bits (189), Expect(2) = 2e-26
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 386 YPWIARKVLTDNSPKLRSSLQALLYKEGVFRVDLLESLLSE 264
           YPWIARKVLTD+SPKL+SSLQALLYKEGVFR+D LESLLSE
Sbjct: 489 YPWIARKVLTDSSPKLKSSLQALLYKEGVFRIDRLESLLSE 529



 Score = 66.6 bits (161), Expect(2) = 2e-26
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -1

Query: 148 DSRLVIKQTLTFILTEKGTFVREILLQELAKGFDALGLATTSAAIS 11
           DSRLV+KQ L+F LTEKGTFVRE+LL+E AKG DALGLAT  +  S
Sbjct: 548 DSRLVVKQILSFTLTEKGTFVREMLLEEFAKGLDALGLATLDSITS 593


>ref|XP_002527120.1| Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
           gi|223533543|gb|EEF35283.1| Protein ABC1, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 711

 Score = 77.4 bits (189), Expect(2) = 6e-26
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 386 YPWIARKVLTDNSPKLRSSLQALLYKEGVFRVDLLESLLSE 264
           YPWIARKVLTD+SPKL+SSLQALLYKEGVFR+D LESLLSE
Sbjct: 487 YPWIARKVLTDSSPKLKSSLQALLYKEGVFRIDRLESLLSE 527



 Score = 65.1 bits (157), Expect(2) = 6e-26
 Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
 Frame = -1

Query: 190 RVKTEKS--SGGSADRDSRLVIKQTLTFILTEKGTFVREILLQELAKGFDALGLAT---- 29
           R +TE++     + D  S++ IK+ L+F LTEKGTFVREILLQE+AKG DALG+AT    
Sbjct: 530 RARTERALVKRQTEDAVSKVAIKEILSFTLTEKGTFVREILLQEVAKGLDALGVATLDSL 589

Query: 28  TSAAISRVP 2
           TS A + +P
Sbjct: 590 TSVATASIP 598


>ref|XP_003548083.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At1g71810, chloroplastic-like [Glycine max]
          Length = 693

 Score = 71.6 bits (174), Expect(2) = 2e-25
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -3

Query: 386 YPWIARKVLTDNSPKLRSSLQALLYKEGVFRVDLLESLLSE 264
           YPWIARKVLTDNSP+L+SSL+ LLYK+GVFR+D LESL++E
Sbjct: 478 YPWIARKVLTDNSPQLKSSLETLLYKDGVFRIDRLESLVTE 518



 Score = 69.3 bits (168), Expect(2) = 2e-25
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 RVKTEKSSGGSAD-RDSRLVIKQTLTFILTEKGTFVREILLQELAKGFDALGLATTSAAI 14
           R KTEK+     +  DS +V+K+ L+F LTEKG FVREI++QE AKG DALGLAT   A 
Sbjct: 521 RAKTEKAIVKQTEGTDSTMVMKEILSFTLTEKGEFVREIIVQEFAKGLDALGLATMETAA 580

Query: 13  SRVP 2
           +RVP
Sbjct: 581 ARVP 584


>ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|222842613|gb|EEE80160.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score = 73.9 bits (180), Expect(2) = 3e-24
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -3

Query: 386 YPWIARKVLTDNSPKLRSSLQALLYKEGVFRVDLLESLLSE 264
           YPWIARKVLTD+SP+LRSSLQALLY++GVFR+D LESLLSE
Sbjct: 481 YPWIARKVLTDSSPQLRSSLQALLYEKGVFRIDRLESLLSE 521



 Score = 62.8 bits (151), Expect(2) = 3e-24
 Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 8/71 (11%)
 Frame = -1

Query: 190 RVKTEKSSGGSA--DRDSRLVIKQTLTFILTEKGTFVREILLQELAK--GFDALGLAT-- 29
           R +TEK+   S   D DS++ +KQ L+F LTEKG FVREILLQE+AK  G DA GLAT  
Sbjct: 524 RARTEKALVKSQLEDNDSKVAVKQILSFTLTEKGAFVREILLQEIAKASGLDAFGLATLD 583

Query: 28  --TSAAISRVP 2
             TS A + +P
Sbjct: 584 YLTSMANTSIP 594


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