BLASTX nr result

ID: Coptis23_contig00032414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032414
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|2...   175   7e-42
ref|XP_002510176.1| conserved hypothetical protein [Ricinus comm...   174   2e-41
emb|CBI19483.3| unnamed protein product [Vitis vinifera]              171   8e-41
ref|XP_002284954.1| PREDICTED: uncharacterized protein LOC100257...   171   8e-41
ref|XP_002301167.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40

>ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|222835486|gb|EEE73921.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  175 bits (443), Expect = 7e-42
 Identities = 89/148 (60%), Positives = 103/148 (69%)
 Frame = -2

Query: 498 NEEGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTLHRARESYRNRXXXX 319
           ++    RGLLTLARQLI+QG  S ALQAVVMA+++ GGD+AVFQ+LHRARE Y NR    
Sbjct: 28  DDNNNVRGLLTLARQLISQGKPSQALQAVVMAMRTKGGDQAVFQSLHRARELYLNRLQEN 87

Query: 318 XXXXXXXXXXXXXAIAEVQPLASESLPFDTGGSSMAMTPDTHASSILAKSGRQQIMLDAF 139
                        AIAE QP  +E  P + G SS +   D H  SILA++GR QI+LDAF
Sbjct: 88  TAVDHLASLFAECAIAEAQPFLAEQTPLNVGASSRSAESDVHVHSILAETGRTQIVLDAF 147

Query: 138 SDGSSFICLQCGGLVSNHRKDEHLTYWC 55
           SDGSSFICLQCGGLVSNHRKDEH  YWC
Sbjct: 148 SDGSSFICLQCGGLVSNHRKDEHYAYWC 175


>ref|XP_002510176.1| conserved hypothetical protein [Ricinus communis]
           gi|223550877|gb|EEF52363.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  174 bits (440), Expect = 2e-41
 Identities = 94/157 (59%), Positives = 107/157 (68%), Gaps = 1/157 (0%)
 Frame = -2

Query: 519 EETRRRQNEEGKA-RGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTLHRARES 343
           E T R    +  A R LL LARQLINQG  + ALQAVVMA+++ GGDEAVFQ+LHRARE 
Sbjct: 11  EMTERESVPQNDAVRELLALARQLINQGKPTQALQAVVMAMRTKGGDEAVFQSLHRAREL 70

Query: 342 YRNRXXXXXXXXXXXXXXXXXAIAEVQPLASESLPFDTGGSSMAMTPDTHASSILAKSGR 163
           YRNR                 AI E QP  SE    + GG S+  TPD H +SILA++GR
Sbjct: 71  YRNRVQENTAVDQLASLFAECAIVEAQPSKSEPSAHNVGGPSV--TPDAHGNSILAETGR 128

Query: 162 QQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWCC 52
            QI+LDAFSDGSSFICLQCGGLVSNHR+DEH  YWCC
Sbjct: 129 MQIVLDAFSDGSSFICLQCGGLVSNHRRDEHYAYWCC 165


>emb|CBI19483.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  171 bits (434), Expect = 8e-41
 Identities = 91/165 (55%), Positives = 113/165 (68%)
 Frame = -2

Query: 540 METDNRGEETRRRQNEEGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTL 361
           M+T+     T    N+    + LL+LARQLIN+G  S ALQ VVMA+++ GGDEA+FQ+L
Sbjct: 1   MDTETAASGT----NQNDVVKDLLSLARQLINEGKPSQALQTVVMAMRTRGGDEAIFQSL 56

Query: 360 HRARESYRNRXXXXXXXXXXXXXXXXXAIAEVQPLASESLPFDTGGSSMAMTPDTHASSI 181
           HRARE YRNR                 AIAEV+P  +E  P D    S+A  PD++ +SI
Sbjct: 57  HRARELYRNRLQANAAADQLACLFAECAIAEVEPCNAEPSPHDVVSPSIA--PDSNETSI 114

Query: 180 LAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWCCPL 46
           LA++GR+QI+LDAFSDGSSFICLQCGGLVSNHRKDEH  YWCC +
Sbjct: 115 LAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCCKI 159


>ref|XP_002284954.1| PREDICTED: uncharacterized protein LOC100257564 [Vitis vinifera]
          Length = 190

 Score =  171 bits (434), Expect = 8e-41
 Identities = 91/165 (55%), Positives = 113/165 (68%)
 Frame = -2

Query: 540 METDNRGEETRRRQNEEGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTL 361
           M+T+     T    N+    + LL+LARQLIN+G  S ALQ VVMA+++ GGDEA+FQ+L
Sbjct: 32  MDTETAASGT----NQNDVVKDLLSLARQLINEGKPSQALQTVVMAMRTRGGDEAIFQSL 87

Query: 360 HRARESYRNRXXXXXXXXXXXXXXXXXAIAEVQPLASESLPFDTGGSSMAMTPDTHASSI 181
           HRARE YRNR                 AIAEV+P  +E  P D    S+A  PD++ +SI
Sbjct: 88  HRARELYRNRLQANAAADQLACLFAECAIAEVEPCNAEPSPHDVVSPSIA--PDSNETSI 145

Query: 180 LAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWCCPL 46
           LA++GR+QI+LDAFSDGSSFICLQCGGLVSNHRKDEH  YWCC +
Sbjct: 146 LAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCCKI 190


>ref|XP_002301167.1| predicted protein [Populus trichocarpa] gi|222842893|gb|EEE80440.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  171 bits (432), Expect = 1e-40
 Identities = 92/169 (54%), Positives = 113/169 (66%), Gaps = 5/169 (2%)
 Frame = -2

Query: 546 MEMETDNR--GEETRRRQNE---EGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGD 382
           ME  T +R   + T  +Q++   +   R +LTLARQLINQGN S ALQAVVMA+++ GGD
Sbjct: 1   MEHRTADREMSDVTAAQQHQVPNDNNVREMLTLARQLINQGNPSQALQAVVMAMRTKGGD 60

Query: 381 EAVFQTLHRARESYRNRXXXXXXXXXXXXXXXXXAIAEVQPLASESLPFDTGGSSMAMTP 202
           +AVFQ+LHRARE Y NR                 AIAE QPL  E  P + G  S +  P
Sbjct: 61  QAVFQSLHRARELYLNRLQESTNVDHLASLFAECAIAEAQPLQDEQTPLNGGDQSPSAVP 120

Query: 201 DTHASSILAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWC 55
           + H +SILA++GR QI+LDAFSDGSSFICL CGGLVSN+RKDEH  +WC
Sbjct: 121 EVHVNSILAETGRTQIVLDAFSDGSSFICLHCGGLVSNYRKDEHYAFWC 169


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