BLASTX nr result

ID: Coptis23_contig00032406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032406
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318460.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002532054.1| heat shock protein, putative [Ricinus commun...   110   2e-22
ref|XP_002272418.1| PREDICTED: small heat shock protein, chlorop...   107   2e-21
ref|NP_001242144.1| uncharacterized protein LOC100798019 [Glycin...   104   1e-20
gb|AEX97053.1| small heat shock protein [Copaifera officinalis]       103   2e-20

>ref|XP_002318460.1| predicted protein [Populus trichocarpa] gi|222859133|gb|EEE96680.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  115 bits (289), Expect = 5e-24
 Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 5/124 (4%)
 Frame = +2

Query: 269 ATNALSYSSCPS-SFVHQIKPSQNGLVAPSCAYFPSNAV--KLSRKPFRVMTVRAQAPTG 439
           A++ LS+SS P  S   ++ PS    + P    FPS     K + KP R+  VRA+A  G
Sbjct: 2   ASSTLSWSSAPLLSSKGEVVPSTKP-ITPCSVSFPSRGGFGKSTTKPSRLALVRAEA-AG 59

Query: 440 ENKDKSVDVHVGQ--SNKGTNIERRPRRSMVDVSPFGLLDPLSPMRTMRSMLDTMDRMFD 613
           ++KD SVDVHV Q  +N+GT +ER+PR+  VD+SPFGLLDPLSPMRTMR MLDTMDR+FD
Sbjct: 60  DHKDTSVDVHVNQQGNNQGTAVERKPRKLAVDISPFGLLDPLSPMRTMRQMLDTMDRLFD 119

Query: 614 EAMT 625
           +A+T
Sbjct: 120 DALT 123


>ref|XP_002532054.1| heat shock protein, putative [Ricinus communis]
           gi|223528276|gb|EEF30326.1| heat shock protein, putative
           [Ricinus communis]
          Length = 234

 Score =  110 bits (276), Expect = 2e-22
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
 Frame = +2

Query: 272 TNALSYSSCP---SSFVHQIKPSQNGLVAPSCAYFPSNAVKLSRKPFRVMTVRAQAPTGE 442
           ++AL +S+ P      +  IKP     +AP    FP   + + R P R+  VRAQA  G+
Sbjct: 3   SSALCWSTTPLMSRKAMATIKP-----MAPCSVSFPQRGLNIGR-PSRLCPVRAQA-AGD 55

Query: 443 NKDKSVDVHVGQSNKGTNIERRPRRSM-VDVSPFGLLDPLSPMRTMRSMLDTMDRMFDEA 619
           NK+ SVDVHV Q N+GT +ER+PRR + VD+SPFG +D LSPMRTMR MLDTMDR+F++A
Sbjct: 56  NKNASVDVHVNQGNQGTAVERKPRRQLAVDISPFGFMDSLSPMRTMRQMLDTMDRLFEDA 115

Query: 620 MT 625
           MT
Sbjct: 116 MT 117


>ref|XP_002272418.1| PREDICTED: small heat shock protein, chloroplastic [Vitis vinifera]
           gi|302143970|emb|CBI23075.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  107 bits (266), Expect = 2e-21
 Identities = 63/121 (52%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = +2

Query: 263 MAATNALSYSSCPSSFVHQIKPSQNGLVAPSCAYFPSNAVKLSRKPFRVMTVRAQAPTGE 442
           MA+  A  +SS P +  H+   S+    AP  A+FPS+         R+  VRA+A TGE
Sbjct: 1   MASLKAFPFSSSPLA-THKPSLSKGVAGAPCSAFFPSSR---HGGRSRLALVRAEA-TGE 55

Query: 443 NKDKSVDVHVGQSNKG-TNIERRPRRSMVDVSPFGLLDPLSPMRTMRSMLDTMDRMFDEA 619
           NKD S+DV V Q NKG T +ER+PRR  +D+SPFGLLDP SPMRTMR M+D MDRMF+E 
Sbjct: 56  NKDASLDVQVHQGNKGATAVERQPRRLALDISPFGLLDPFSPMRTMRQMMDAMDRMFEET 115

Query: 620 M 622
           +
Sbjct: 116 V 116


>ref|NP_001242144.1| uncharacterized protein LOC100798019 [Glycine max]
           gi|255647092|gb|ACU24014.1| unknown [Glycine max]
          Length = 231

 Score =  104 bits (259), Expect = 1e-20
 Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
 Frame = +2

Query: 332 QNGLVAPSCAYFPSNAVKLSRKPF-RVMTVRAQAPTGENKDKSVDV-HVGQSNKGTNIER 505
           QN  +AP  A FPS      RK F R++ VRAQA +G+NKD SV+V HV + + GT +E+
Sbjct: 23  QNNAIAPCMASFPS------RKEFPRLVRVRAQA-SGDNKDNSVEVQHVNKGDHGTAVEK 75

Query: 506 RPRRSMVDVSPFGLLDPLSPMRTMRSMLDTMDRMFDEAMT 625
           +PRR+ +D+SPFGLLDP SPMR+MR +LDTMDR+F++ MT
Sbjct: 76  KPRRTSMDISPFGLLDPWSPMRSMRQILDTMDRIFEDTMT 115


>gb|AEX97053.1| small heat shock protein [Copaifera officinalis]
          Length = 242

 Score =  103 bits (258), Expect = 2e-20
 Identities = 66/126 (52%), Positives = 79/126 (62%), Gaps = 11/126 (8%)
 Frame = +2

Query: 278 ALSYSSC-PS--------SFVHQIKPSQNGLVAPSCAYFPSNAVKLSRKPFRVMTVRAQA 430
           ALS+S+C PS        SF    +   N    P  A FPS      R   R+  VRAQA
Sbjct: 4   ALSFSTCCPSPLLSHRGVSFSANPRDKSNVAAPPCSASFPSRGPMRMR---RLGVVRAQA 60

Query: 431 PTGENKDKS-VDVHVGQSNK-GTNIERRPRRSMVDVSPFGLLDPLSPMRTMRSMLDTMDR 604
             GENKD S VDVHV + N+ GT +ERRPR + +D+SPFGLLDP SPMRTMR MLDTMDR
Sbjct: 61  -AGENKDSSSVDVHVSKDNQQGTAVERRPRTTAIDISPFGLLDPWSPMRTMRQMLDTMDR 119

Query: 605 MFDEAM 622
           +F++ M
Sbjct: 120 IFEDTM 125


Top