BLASTX nr result

ID: Coptis23_contig00032405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032405
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304405.1| condensin complex components subunit [Populu...   372   e-101
ref|XP_002326795.1| condensin complex components subunit [Populu...   366   2e-99
ref|XP_003540523.1| PREDICTED: structural maintenance of chromos...   362   4e-98
ref|XP_003542846.1| PREDICTED: structural maintenance of chromos...   361   6e-98
ref|XP_002510963.1| Structural maintenance of chromosome, putati...   361   6e-98

>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
            gi|222841837|gb|EEE79384.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  372 bits (954), Expect = e-101
 Identities = 185/222 (83%), Positives = 201/222 (90%)
 Frame = -3

Query: 667  HDQAESEFRLIRSKIKERDSEINIIFKEQQKLQRKIGEESLEKKKMENEVKRMEMEQKDC 488
            HDQ +SE   IR K+KERDS+I+ I KEQQKLQ K+ E  L++KK+ENEVKRMEMEQKDC
Sbjct: 866  HDQVQSELNAIRLKMKERDSQISSILKEQQKLQHKLSETKLDRKKLENEVKRMEMEQKDC 925

Query: 487  SFKVDKLLEKHTWIASEKQLFGKSGTDYDFSSCNPHEARGKLEILQAEQSELEKRVNKKV 308
            S KVDKL+EKHTWIASEKQLFG+SGTDYDF S NP +A+ +L+ LQAEQS LEKRVNKKV
Sbjct: 926  SMKVDKLIEKHTWIASEKQLFGRSGTDYDFLSLNPSKAKEELDKLQAEQSGLEKRVNKKV 985

Query: 307  MAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKETLHVTWVKVNNDFGSIFST 128
            MAMFEKAEDEYN+L+SKKNIIENDKSKI KVIEELDEKKKETL VTWVKVNNDFGSIFST
Sbjct: 986  MAMFEKAEDEYNDLMSKKNIIENDKSKINKVIEELDEKKKETLKVTWVKVNNDFGSIFST 1045

Query: 127  LLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 2
            LLPGTMAKLEPPEGCSFLDGLEVRVAFG VWKQSLSELSGGQ
Sbjct: 1046 LLPGTMAKLEPPEGCSFLDGLEVRVAFGGVWKQSLSELSGGQ 1087


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
            gi|222834117|gb|EEE72594.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  366 bits (939), Expect = 2e-99
 Identities = 184/222 (82%), Positives = 202/222 (90%)
 Frame = -3

Query: 667  HDQAESEFRLIRSKIKERDSEINIIFKEQQKLQRKIGEESLEKKKMENEVKRMEMEQKDC 488
            HDQA+SE   IR K+ E DS+I+ I KEQQKLQ K+GE  LE+KK+ENEVKRMEMEQKDC
Sbjct: 866  HDQAQSELDSIRLKMLECDSQISSILKEQQKLQHKLGETKLERKKLENEVKRMEMEQKDC 925

Query: 487  SFKVDKLLEKHTWIASEKQLFGKSGTDYDFSSCNPHEARGKLEILQAEQSELEKRVNKKV 308
            S KVD+L+EKH WIASEKQLFG+SGTDY+F S +P +AR +LE LQAEQS LEKRVNKKV
Sbjct: 926  STKVDRLIEKHAWIASEKQLFGRSGTDYEFMSRDPTKAREELERLQAEQSGLEKRVNKKV 985

Query: 307  MAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKETLHVTWVKVNNDFGSIFST 128
            MAMFEKAEDEYN+L+SKKNIIENDKSKI+KVIEELDEKKKETL VTWVKVNNDFGS+FST
Sbjct: 986  MAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLKVTWVKVNNDFGSVFST 1045

Query: 127  LLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 2
            LLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ
Sbjct: 1046 LLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 1087


>ref|XP_003540523.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  362 bits (929), Expect = 4e-98
 Identities = 180/221 (81%), Positives = 201/221 (90%)
 Frame = -3

Query: 664  DQAESEFRLIRSKIKERDSEINIIFKEQQKLQRKIGEESLEKKKMENEVKRMEMEQKDCS 485
            DQ +S+ + +R K+KE D EI+ I KEQQKL+ KI E +LE+K+MENEVKRMEMEQKDCS
Sbjct: 867  DQVQSQLKSVRLKMKECDQEISAIIKEQQKLEHKISESNLERKRMENEVKRMEMEQKDCS 926

Query: 484  FKVDKLLEKHTWIASEKQLFGKSGTDYDFSSCNPHEARGKLEILQAEQSELEKRVNKKVM 305
             +VDKL+EKH WIASEKQLFG+SGTDYDFSS +P +AR +LE LQAEQS LEKRVNKKVM
Sbjct: 927  VRVDKLIEKHAWIASEKQLFGRSGTDYDFSSRDPTKAREELEKLQAEQSGLEKRVNKKVM 986

Query: 304  AMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKETLHVTWVKVNNDFGSIFSTL 125
            AMFEKAEDEYN+L+SKKNIIENDKSKI+ VIEELDEKKKETL+VTW+KVNNDFGSIFS L
Sbjct: 987  AMFEKAEDEYNDLMSKKNIIENDKSKIKMVIEELDEKKKETLNVTWIKVNNDFGSIFSML 1046

Query: 124  LPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 2
            LPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ
Sbjct: 1047 LPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 1087


>ref|XP_003542846.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  361 bits (927), Expect = 6e-98
 Identities = 179/221 (80%), Positives = 202/221 (91%)
 Frame = -3

Query: 664  DQAESEFRLIRSKIKERDSEINIIFKEQQKLQRKIGEESLEKKKMENEVKRMEMEQKDCS 485
            DQ +S+ + +R K+KE D EI+ I K+QQKL+ KI E +LE+K+MENEVKRME+EQKDCS
Sbjct: 867  DQVQSQLKSVRLKMKECDKEISAIIKDQQKLEHKISESNLERKRMENEVKRMELEQKDCS 926

Query: 484  FKVDKLLEKHTWIASEKQLFGKSGTDYDFSSCNPHEARGKLEILQAEQSELEKRVNKKVM 305
             +VDKL+EKH WIASEKQLFG+SGTDYDFSS +P +AR +LE LQAEQS LEKRVNKKVM
Sbjct: 927  VRVDKLIEKHAWIASEKQLFGRSGTDYDFSSRDPTKAREELEKLQAEQSGLEKRVNKKVM 986

Query: 304  AMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKETLHVTWVKVNNDFGSIFSTL 125
            AMFEKAEDEYN+L+SKK IIENDKSKI+KVIEELDEKKKETL+VTW+KVNNDFGSIFSTL
Sbjct: 987  AMFEKAEDEYNDLMSKKYIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTL 1046

Query: 124  LPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 2
            LPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ
Sbjct: 1047 LPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 1087


>ref|XP_002510963.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223550078|gb|EEF51565.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1176

 Score =  361 bits (927), Expect = 6e-98
 Identities = 180/222 (81%), Positives = 202/222 (90%)
 Frame = -3

Query: 667  HDQAESEFRLIRSKIKERDSEINIIFKEQQKLQRKIGEESLEKKKMENEVKRMEMEQKDC 488
            H+QA+S+ +LI  K+KE DS+I+ I KEQQKLQ+K+ E  L++KK+ENEVKRME+EQKDC
Sbjct: 866  HEQAQSDLKLISQKMKECDSQISSILKEQQKLQQKVSETKLDRKKLENEVKRMELEQKDC 925

Query: 487  SFKVDKLLEKHTWIASEKQLFGKSGTDYDFSSCNPHEARGKLEILQAEQSELEKRVNKKV 308
            S KVDKL+EKH WIASEKQLFG+SGTDYDF S +P +AR +L+ LQ EQS LEKRVNKKV
Sbjct: 926  SMKVDKLIEKHAWIASEKQLFGRSGTDYDFMSRDPFKAREELDKLQTEQSGLEKRVNKKV 985

Query: 307  MAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKETLHVTWVKVNNDFGSIFST 128
            MAMFEKAEDEYN+L+SKKNIIENDKSKI+KVIEELDEKKKETL VTWVKVNNDFGSIFST
Sbjct: 986  MAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLKVTWVKVNNDFGSIFST 1045

Query: 127  LLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQ 2
            LLPGTMAKLEPPEG SFLDGLEVRVAFGSVWKQSLSELSGGQ
Sbjct: 1046 LLPGTMAKLEPPEGGSFLDGLEVRVAFGSVWKQSLSELSGGQ 1087


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