BLASTX nr result

ID: Coptis23_contig00032386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032386
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886517.1| hypothetical protein ARALYDRAFT_338204 [Arab...    59   3e-07
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    59   5e-07
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    59   5e-07
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    59   5e-07
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    59   5e-07

>ref|XP_002886517.1| hypothetical protein ARALYDRAFT_338204 [Arabidopsis lyrata subsp.
           lyrata] gi|297332358|gb|EFH62776.1| hypothetical protein
           ARALYDRAFT_338204 [Arabidopsis lyrata subsp. lyrata]
          Length = 173

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/62 (43%), Positives = 38/62 (61%)
 Frame = +3

Query: 54  QFYVFHFPIFWTAGSTLWIGGRLRLTYIVDGYTCIQHSRLQWYLSNQATIRSDLYNHLMD 233
           +FY +      T G T+   GRL   Y+VD Y  I+  RL+W  +NQ T+R+DLYN++ D
Sbjct: 105 EFYAYQIQTRLTEGKTIIKAGRLLHQYVVDAYAAIEAERLRWNRNNQETLRADLYNNVFD 164

Query: 234 AV 239
           AV
Sbjct: 165 AV 166


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +3

Query: 54  QFYVFHFPIFWTAGSTLWIGGRLRLTYIVDGYTCIQHSRLQWYLSNQATIRSDLYNHLMD 233
           ++Y +         +TL IGGRL   Y+VD +T I+  RL+W   NQ  +R+DLY ++ D
Sbjct: 292 EYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCD 351

Query: 234 AVVAG 248
           AVV G
Sbjct: 352 AVVRG 356


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +3

Query: 54  QFYVFHFPIFWTAGSTLWIGGRLRLTYIVDGYTCIQHSRLQWYLSNQATIRSDLYNHLMD 233
           ++Y +         +TL IGGRL   Y+VD +T I+  RL+W   NQ  +R+DLY ++ D
Sbjct: 292 EYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCD 351

Query: 234 AVVAG 248
           AVV G
Sbjct: 352 AVVRG 356


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +3

Query: 54  QFYVFHFPIFWTAGSTLWIGGRLRLTYIVDGYTCIQHSRLQWYLSNQATIRSDLYNHLMD 233
           ++Y +         +TL IGGRL   Y+VD +T I+  RL+W   NQ  +R+DLY ++ D
Sbjct: 265 EYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCD 324

Query: 234 AVVAG 248
           AVV G
Sbjct: 325 AVVRG 329


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +3

Query: 54  QFYVFHFPIFWTAGSTLWIGGRLRLTYIVDGYTCIQHSRLQWYLSNQATIRSDLYNHLMD 233
           ++Y +         +TL IGGRL   Y+VD +T I+  RL+W   NQ  +R+DLY ++ D
Sbjct: 292 EYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCD 351

Query: 234 AVVAG 248
           AVV G
Sbjct: 352 AVVRG 356


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