BLASTX nr result

ID: Coptis23_contig00032381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032381
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248...    84   9e-15
emb|CBI30188.3| unnamed protein product [Vitis vinifera]               84   9e-15
emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]    84   9e-15
ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ...    82   5e-14
ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254...    81   8e-14

>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
          Length = 2411

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/60 (73%), Positives = 49/60 (81%)
 Frame = +2

Query: 62  ASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEK 241
           A   S  Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEK
Sbjct: 390 AMGESTFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEK 449


>emb|CBI30188.3| unnamed protein product [Vitis vinifera]
          Length = 1369

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/60 (73%), Positives = 49/60 (81%)
 Frame = +2

Query: 62  ASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEK 241
           A   S  Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEK
Sbjct: 375 AMGESTFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEK 434


>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
          Length = 2427

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/60 (73%), Positives = 49/60 (81%)
 Frame = +2

Query: 62  ASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEK 241
           A   S  Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEK
Sbjct: 390 AMGESTFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEK 449


>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1362

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/60 (66%), Positives = 53/60 (88%)
 Frame = +2

Query: 62  ASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEK 241
           ++E+   QA+ + ++QKELE E++F+KESN NLA+QL+KTQESNIELVSILQELE+TIEK
Sbjct: 350 SAENMELQAKDMGNLQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQELEDTIEK 409


>ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera]
          Length = 1395

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/53 (73%), Positives = 48/53 (90%)
 Frame = +2

Query: 83  QAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEK 241
           QA+ +++IQ+ELE EIKFQKESN NL +QL+KTQESNIELVS+LQE+EE IEK
Sbjct: 397 QAQNMNNIQQELEDEIKFQKESNANLTIQLKKTQESNIELVSVLQEMEEMIEK 449


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