BLASTX nr result
ID: Coptis23_contig00032336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00032336
(687 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu... 256 4e-66
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 252 5e-65
emb|CBI23000.3| unnamed protein product [Vitis vinifera] 252 5e-65
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 252 5e-65
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|2... 244 1e-62
>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
gi|223544025|gb|EEF45551.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 1357
Score = 256 bits (653), Expect = 4e-66
Identities = 141/230 (61%), Positives = 176/230 (76%), Gaps = 3/230 (1%)
Frame = -2
Query: 683 KNLSKACLHPEKNIHVEIKGIYEKAISTLCFSEWVGQCKDEL-VDVSIMWEVLNDKTEAS 507
KNL++ L+ K+ + E+ I EKAIS LCFSE + +C+++ V+V+ ++E+LN K
Sbjct: 517 KNLNELYLNSGKDPNTELMAILEKAISRLCFSEGLAKCEEDYAVEVTAIYELLNSKKGIK 576
Query: 506 YGLLKDEILDQLLDAISTSQEDKIVRASVFILTTIIYKNKAVVEDIKRKGLRLCDLASAL 327
Y +LKD ILDQLL AIS+S+E+ +VRAS+ ILTTI+ NK+ VEDIK+KGLRLCDLA+AL
Sbjct: 577 YTILKDIILDQLLTAISSSKEETVVRASMSILTTIVSVNKSAVEDIKKKGLRLCDLANAL 636
Query: 326 KRNVHEAAILIYLINPSPTEIKTLELLPALLEVACTSN--RRVPIPIQLTPLAASLMIIE 153
KRNVHEAAILIYLINP TEIKTLELLPAL+E+ CTSN + P +TP AASLMIIE
Sbjct: 637 KRNVHEAAILIYLINPPLTEIKTLELLPALMEILCTSNSYKEKPASPLITPPAASLMIIE 696
Query: 152 VLVTAFDFTTNRMHLEAISSPPVLSRLVKAAINKNTEEITSLATILIKCM 3
VLVTAFD TN +HL AI+SP VLSRL+ A + N EE S+ ILIKCM
Sbjct: 697 VLVTAFDRATNNVHLAAINSPRVLSRLLDVARDHNLEECISMTNILIKCM 746
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1339
Score = 252 bits (643), Expect = 5e-65
Identities = 141/229 (61%), Positives = 170/229 (74%), Gaps = 2/229 (0%)
Frame = -2
Query: 683 KNLSKACLHPEKNIHVEIKGIYEKAISTLCFSEWVGQC-KDELVDVSIMWEVLNDKTEAS 507
KNL + CLHPEK+ H E+ +KAIS L FSE G+ +D V+V+ ++E+L +KT
Sbjct: 500 KNLHEVCLHPEKDSHGELLRALDKAISKLWFSEGQGKYDEDSSVEVTTIYEMLTNKTGVK 559
Query: 506 YGLLKDEILDQLLDAISTSQEDKIVRASVFILTTIIYKNKAVVEDIKRKGLRLCDLASAL 327
Y LLKD ILDQLL +ISTS+++ IVRASV IL TII NK+V++DIK+KGL+L LA+AL
Sbjct: 560 YTLLKDAILDQLLSSISTSKKEGIVRASVSILLTIIAGNKSVIDDIKKKGLQLGHLANAL 619
Query: 326 KRNVHEAAILIYLINPSPTEIKTLELLPALLEVACTSNRRVPIPIQL-TPLAASLMIIEV 150
KRNV+EAA LIYLINPSPTEIKTLELLP L+ V CTSN P L TP AASLMIIE
Sbjct: 620 KRNVYEAATLIYLINPSPTEIKTLELLPTLMNVVCTSNNYAGGPASLPTPPAASLMIIEA 679
Query: 149 LVTAFDFTTNRMHLEAISSPPVLSRLVKAAINKNTEEITSLATILIKCM 3
L+ AFD+ TN MHL ISSP VLS L+ A N N EE+ LATIL+KCM
Sbjct: 680 LIAAFDYATNSMHLAEISSPQVLSGLLDVARNNNLEELIPLATILVKCM 728
>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
Length = 1274
Score = 252 bits (643), Expect = 5e-65
Identities = 141/229 (61%), Positives = 170/229 (74%), Gaps = 2/229 (0%)
Frame = -2
Query: 683 KNLSKACLHPEKNIHVEIKGIYEKAISTLCFSEWVGQC-KDELVDVSIMWEVLNDKTEAS 507
KNL + CLHPEK+ H E+ +KAIS L FSE G+ +D V+V+ ++E+L +KT
Sbjct: 435 KNLHEVCLHPEKDSHGELLRALDKAISKLWFSEGQGKYDEDSSVEVTTIYEMLTNKTGVK 494
Query: 506 YGLLKDEILDQLLDAISTSQEDKIVRASVFILTTIIYKNKAVVEDIKRKGLRLCDLASAL 327
Y LLKD ILDQLL +ISTS+++ IVRASV IL TII NK+V++DIK+KGL+L LA+AL
Sbjct: 495 YTLLKDAILDQLLSSISTSKKEGIVRASVSILLTIIAGNKSVIDDIKKKGLQLGHLANAL 554
Query: 326 KRNVHEAAILIYLINPSPTEIKTLELLPALLEVACTSNRRVPIPIQL-TPLAASLMIIEV 150
KRNV+EAA LIYLINPSPTEIKTLELLP L+ V CTSN P L TP AASLMIIE
Sbjct: 555 KRNVYEAATLIYLINPSPTEIKTLELLPTLMNVVCTSNNYAGGPASLPTPPAASLMIIEA 614
Query: 149 LVTAFDFTTNRMHLEAISSPPVLSRLVKAAINKNTEEITSLATILIKCM 3
L+ AFD+ TN MHL ISSP VLS L+ A N N EE+ LATIL+KCM
Sbjct: 615 LIAAFDYATNSMHLAEISSPQVLSGLLDVARNNNLEELIPLATILVKCM 663
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 252 bits (643), Expect = 5e-65
Identities = 141/229 (61%), Positives = 170/229 (74%), Gaps = 2/229 (0%)
Frame = -2
Query: 683 KNLSKACLHPEKNIHVEIKGIYEKAISTLCFSEWVGQC-KDELVDVSIMWEVLNDKTEAS 507
KNL + CLHPEK+ H E+ +KAIS L FSE G+ +D V+V+ ++E+L +KT
Sbjct: 500 KNLHEVCLHPEKDSHGELLRALDKAISKLWFSEGQGKYDEDSSVEVTTIYEMLTNKTGVK 559
Query: 506 YGLLKDEILDQLLDAISTSQEDKIVRASVFILTTIIYKNKAVVEDIKRKGLRLCDLASAL 327
Y LLKD ILDQLL +ISTS+++ IVRASV IL TII NK+V++DIK+KGL+L LA+AL
Sbjct: 560 YTLLKDAILDQLLSSISTSKKEGIVRASVSILLTIIAGNKSVIDDIKKKGLQLGHLANAL 619
Query: 326 KRNVHEAAILIYLINPSPTEIKTLELLPALLEVACTSNRRVPIPIQL-TPLAASLMIIEV 150
KRNV+EAA LIYLINPSPTEIKTLELLP L+ V CTSN P L TP AASLMIIE
Sbjct: 620 KRNVYEAATLIYLINPSPTEIKTLELLPTLMNVVCTSNNYAGGPASLPTPPAASLMIIEA 679
Query: 149 LVTAFDFTTNRMHLEAISSPPVLSRLVKAAINKNTEEITSLATILIKCM 3
L+ AFD+ TN MHL ISSP VLS L+ A N N EE+ LATIL+KCM
Sbjct: 680 LIAAFDYATNSMHLAEISSPQVLSGLLDVARNNNLEELIPLATILVKCM 728
>ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|222838614|gb|EEE76979.1|
predicted protein [Populus trichocarpa]
Length = 1305
Score = 244 bits (622), Expect = 1e-62
Identities = 132/230 (57%), Positives = 168/230 (73%), Gaps = 3/230 (1%)
Frame = -2
Query: 683 KNLSKACLHPEKNIHVEIKGIYEKAISTLCFSEWVGQCKDELV-DVSIMWEVLNDKTEAS 507
+N +K C+H ++ E G EK IS LCFSE + + ++ +V ++++LN+K
Sbjct: 449 ENFNKFCVHYRRDSSAEFIGDIEKVISKLCFSEGLAKFDEDYAGEVMTIYKMLNNKRGVK 508
Query: 506 YGLLKDEILDQLLDAISTSQEDKIVRASVFILTTIIYKNKAVVEDIKRKGLRLCDLASAL 327
Y +LKD +LDQLL AISTS+E++++RASV ILTTII NK+ +EDIK KGLRLCDLA+AL
Sbjct: 509 YTMLKDVMLDQLLTAISTSKEERVIRASVSILTTIISINKSAIEDIKNKGLRLCDLATAL 568
Query: 326 KRNVHEAAILIYLINPSPTEIKTLELLPALLEVACTSNRRVPIPIQ--LTPLAASLMIIE 153
KRNVHEAAILI++INPSP E+KTLELLPAL+EV C+SN + P LTP AASLMIIE
Sbjct: 569 KRNVHEAAILIHMINPSPAEMKTLELLPALVEVVCSSNSYMERPATPLLTPPAASLMIIE 628
Query: 152 VLVTAFDFTTNRMHLEAISSPPVLSRLVKAAINKNTEEITSLATILIKCM 3
VLVTAFD TN HL AI+SP VL L+ A N N E SLA +++KCM
Sbjct: 629 VLVTAFDCATNNTHLAAINSPRVLRELLNVAGNNNLEGYVSLANVIVKCM 678