BLASTX nr result
ID: Coptis23_contig00032330
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00032330 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312240.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 ref|XP_002515796.1| conserved hypothetical protein [Ricinus comm... 56 3e-06 >ref|XP_002312240.1| predicted protein [Populus trichocarpa] gi|222852060|gb|EEE89607.1| predicted protein [Populus trichocarpa] Length = 1126 Score = 58.5 bits (140), Expect = 5e-07 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Frame = +3 Query: 6 LNSQEWETLIEDFQSG--REEKWXXXXXXXXXXXXXXXXXXXRKDISNLKLSLIIFLEEY 179 L+SQ+WE+LIEDFQ G R KW +KD LKL L++ LEE+ Sbjct: 12 LSSQDWESLIEDFQQGGPRHHKW-TAPHLLQSLLDQAFTSLLKKDFP-LKLPLLLLLEEF 69 Query: 180 SSTLIPSEPDIESCLGKLLETLHSFIQAPIDGI 278 S T E+ L +LLE+L S IQ+P+DG+ Sbjct: 70 SETFFTH----ETHLNRLLESLRSVIQSPLDGV 98 >ref|XP_002515796.1| conserved hypothetical protein [Ricinus communis] gi|223545065|gb|EEF46577.1| conserved hypothetical protein [Ricinus communis] Length = 1113 Score = 55.8 bits (133), Expect = 3e-06 Identities = 36/88 (40%), Positives = 48/88 (54%) Frame = +3 Query: 15 QEWETLIEDFQSGREEKWXXXXXXXXXXXXXXXXXXXRKDISNLKLSLIIFLEEYSSTLI 194 QEWE LIEDFQ+G + KW +KD K+ L++FLE++S T Sbjct: 15 QEWEALIEDFQNGHQ-KWPSLSSTLLDYSLCSLL---KKDFL-FKIPLLLFLEQFSETFF 69 Query: 195 PSEPDIESCLGKLLETLHSFIQAPIDGI 278 +E L +LLETL S IQ+P+DGI Sbjct: 70 TTEAH----LTRLLETLRSTIQSPVDGI 93