BLASTX nr result

ID: Coptis23_contig00032330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032330
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312240.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002515796.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002312240.1| predicted protein [Populus trichocarpa] gi|222852060|gb|EEE89607.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = +3

Query: 6   LNSQEWETLIEDFQSG--REEKWXXXXXXXXXXXXXXXXXXXRKDISNLKLSLIIFLEEY 179
           L+SQ+WE+LIEDFQ G  R  KW                   +KD   LKL L++ LEE+
Sbjct: 12  LSSQDWESLIEDFQQGGPRHHKW-TAPHLLQSLLDQAFTSLLKKDFP-LKLPLLLLLEEF 69

Query: 180 SSTLIPSEPDIESCLGKLLETLHSFIQAPIDGI 278
           S T        E+ L +LLE+L S IQ+P+DG+
Sbjct: 70  SETFFTH----ETHLNRLLESLRSVIQSPLDGV 98


>ref|XP_002515796.1| conserved hypothetical protein [Ricinus communis]
           gi|223545065|gb|EEF46577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1113

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/88 (40%), Positives = 48/88 (54%)
 Frame = +3

Query: 15  QEWETLIEDFQSGREEKWXXXXXXXXXXXXXXXXXXXRKDISNLKLSLIIFLEEYSSTLI 194
           QEWE LIEDFQ+G + KW                   +KD    K+ L++FLE++S T  
Sbjct: 15  QEWEALIEDFQNGHQ-KWPSLSSTLLDYSLCSLL---KKDFL-FKIPLLLFLEQFSETFF 69

Query: 195 PSEPDIESCLGKLLETLHSFIQAPIDGI 278
            +E      L +LLETL S IQ+P+DGI
Sbjct: 70  TTEAH----LTRLLETLRSTIQSPVDGI 93


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