BLASTX nr result

ID: Coptis23_contig00032318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032318
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   185   4e-45
ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   184   5e-45
emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]   183   1e-44
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002314258.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/157 (56%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
 Frame = -2

Query: 481 EQWLSADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNI 302
           EQWL    NT CPVTKQ LPKDFDLTPNHTLRRLIQAWC+ NA++G+DRIPTPK  L+  
Sbjct: 37  EQWLFTTKNTICPVTKQSLPKDFDLTPNHTLRRLIQAWCIDNASSGIDRIPTPKPCLDKF 96

Query: 301 HILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDG 122
           H+LKL++DL  P+LQ K L +L  LAAEN+RNRK M E GV KA++  I+ C+KK   DG
Sbjct: 97  HLLKLIKDLHLPRLQMKTLVQLELLAAENDRNRKYMAETGVPKALLLFIVTCFKKGRFDG 156

Query: 121 VREALNVLSIISIPIAEINLFIYD---FFDSIAWVLR 20
           ++EA+++L +I IP  E    + +     +S+ WVLR
Sbjct: 157 IQEAVSILRLIRIPPQESRALLSENDQIIESLTWVLR 193


>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/156 (55%), Positives = 112/156 (71%), Gaps = 3/156 (1%)
 Frame = -2

Query: 481 EQWLSADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNI 302
           EQWL    +T CPVTKQPL +DF LTPNHTLRRLIQAWC  NA NGVDRIPTPK+PL+  
Sbjct: 43  EQWLLTAKDTTCPVTKQPLERDFVLTPNHTLRRLIQAWCADNATNGVDRIPTPKTPLDRT 102

Query: 301 HILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDG 122
           H++KL++DL   QL  K L+++ +L  +NERNR CM +AG AKA+V +II C+K+N   G
Sbjct: 103 HVVKLIRDLGVAQLYLKTLQKMEALTRDNERNRNCMADAGAAKAIVLLIIKCFKENKTTG 162

Query: 121 VREALNVLSIISIPIAEINLFI---YDFFDSIAWVL 23
           V E L +L +I  P +E+ L +   YDF D++ W L
Sbjct: 163 VEEGLRILHLIWSPTSEMKLLLKENYDFVDAVTWAL 198


>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/156 (55%), Positives = 112/156 (71%), Gaps = 3/156 (1%)
 Frame = -2

Query: 481 EQWLSADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNI 302
           EQWL    +T CPVTKQPL +DF LTPNHTLRRLIQAWC  NA NGVD+IPTPK+PL+  
Sbjct: 43  EQWLLTAKDTTCPVTKQPLERDFVLTPNHTLRRLIQAWCAANATNGVDQIPTPKTPLDRT 102

Query: 301 HILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDG 122
           H++KL++DL   QL  K L+++ +L  +NERNR CM +AG AKA+V +II C+K+N   G
Sbjct: 103 HVVKLIRDLGVAQLYLKTLQKMEALTRDNERNRNCMADAGAAKAIVLLIIKCFKENKTTG 162

Query: 121 VREALNVLSIISIPIAEINLFI---YDFFDSIAWVL 23
           V E L +L +I  P +E+ L +   YDF D++ W L
Sbjct: 163 VEEGLRILHLIWSPTSEMKLLLKENYDFVDAVTWAL 198


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/157 (57%), Positives = 112/157 (71%), Gaps = 4/157 (2%)
 Frame = -2

Query: 481 EQWLSADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNI 302
           E WL    NT CPVTKQPL KD DLTPNHTLRRLIQAWC  NA++GVDRIPTPK  L+  
Sbjct: 37  EHWLFTSQNTACPVTKQPLQKDLDLTPNHTLRRLIQAWCTENASHGVDRIPTPKPCLDKA 96

Query: 301 HILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDG 122
           H+LKL+++L   +LQ K L RL  LAAENERNRKCM++AG+ KAM+  I AC+KK  + G
Sbjct: 97  HVLKLIKNLSHHELQIKTLTRLELLAAENERNRKCMVDAGLPKAMLLFIAACFKKGQVSG 156

Query: 121 VREALNVLSIISIPIAEINLFIYD----FFDSIAWVL 23
           ++EAL++L  I IP +E   F  +      +S+ WVL
Sbjct: 157 IQEALSILCFIRIPRSESRAFYSENDDKIIESLTWVL 193


>ref|XP_002314258.1| predicted protein [Populus trichocarpa] gi|222850666|gb|EEE88213.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  175 bits (444), Expect = 3e-42
 Identities = 91/166 (54%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
 Frame = -2

Query: 481 EQWL-SADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNN 305
           EQWL +A  N  CPVTKQ LP+D +LTPNHTLRRLIQ+WC  NA  GVDRIPTPKSP+  
Sbjct: 37  EQWLKAAKSNPTCPVTKQSLPRDSELTPNHTLRRLIQSWCTVNAIYGVDRIPTPKSPIKK 96

Query: 304 IHILKLLQDLWCP--QLQSKALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNV 131
             I +L++DL  P   L++KALRR+ +LA ENERNR CM+EAGV KA V  II C+K+  
Sbjct: 97  SQIFRLIKDLDAPDDHLRTKALRRMEALAKENERNRTCMVEAGVTKAAVLFIIKCFKEGK 156

Query: 130 IDGVREALNVLSIISIPIAEINLFI---YDFFDSIAWVLRRGKANH 2
             G+ E L +L +I  P  EI L +    DF DS+ W+LR  + N+
Sbjct: 157 TAGLEEVLRILYLIWNPSQEIKLLVRENQDFIDSLTWILRCDQINN 202


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