BLASTX nr result

ID: Coptis23_contig00032306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032306
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273008.1| PREDICTED: LRR receptor-like serine/threonin...   209   3e-52
ref|XP_002310285.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
ref|XP_002327773.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
ref|XP_002280730.1| PREDICTED: probable leucine-rich repeat rece...   194   1e-47
ref|XP_004146484.1| PREDICTED: probable LRR receptor-like serine...   191   7e-47

>ref|XP_002273008.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2
           [Vitis vinifera] gi|147819728|emb|CAN73589.1|
           hypothetical protein VITISV_026204 [Vitis vinifera]
          Length = 422

 Score =  209 bits (532), Expect = 3e-52
 Identities = 96/135 (71%), Positives = 112/135 (82%)
 Frame = -3

Query: 405 FIKGDSRTHWGDIQVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDI 226
           F  GDS+T+WGDI+VLK+L+K  DP SV PGSC+SSWDF +DPCD ++ E FTCGFRCD+
Sbjct: 21  FFLGDSKTYWGDIEVLKELRKGLDPGSVIPGSCLSSWDFSVDPCDSVFGERFTCGFRCDV 80

Query: 225 VVSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLA 46
           VVS  SRVTEISLD+AGY GSLSS  WNLPYLETLDLS+NFF+GS+  SLS L  LRRL 
Sbjct: 81  VVSGSSRVTEISLDQAGYAGSLSSASWNLPYLETLDLSDNFFSGSVSASLSNLTRLRRLG 140

Query: 45  LSRNSFTGAIPASLG 1
           LSRNSF+G IP S+G
Sbjct: 141 LSRNSFSGEIPTSIG 155


>ref|XP_002310285.1| predicted protein [Populus trichocarpa] gi|222853188|gb|EEE90735.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  196 bits (497), Expect = 4e-48
 Identities = 89/134 (66%), Positives = 109/134 (81%)
 Frame = -3

Query: 402 IKGDSRTHWGDIQVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDIV 223
           +  +S+T WGDI+VLK++K   D +SV PGSC+SSWDF +DPCD ++SE FTCGFRCDIV
Sbjct: 13  VGAESKTFWGDIEVLKEVKSAVDRNSVNPGSCLSSWDFTVDPCDSLFSESFTCGFRCDIV 72

Query: 222 VSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLAL 43
           VSE SRVTE+SLD+AGY+GSL+S+ WNLPYL+TLDLS NFF G IP S+S L  L RL L
Sbjct: 73  VSESSRVTELSLDQAGYSGSLASISWNLPYLQTLDLSNNFFYGQIPESVSNLTQLSRLGL 132

Query: 42  SRNSFTGAIPASLG 1
           SRN F+G IP S+G
Sbjct: 133 SRNMFSGEIPTSIG 146


>ref|XP_002327773.1| predicted protein [Populus trichocarpa] gi|222836858|gb|EEE75251.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  196 bits (497), Expect = 4e-48
 Identities = 87/134 (64%), Positives = 112/134 (83%)
 Frame = -3

Query: 402 IKGDSRTHWGDIQVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDIV 223
           ++ +S+T+WGD++VLK++K   +P+SV+PGSC+S+WDF +DPCDH++SE FTCGFRCDIV
Sbjct: 22  VEVESKTYWGDLEVLKEVKTAVNPNSVSPGSCLSAWDFTVDPCDHLFSEKFTCGFRCDIV 81

Query: 222 VSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLAL 43
           VS  SRVTE+SLD+AGY+G+LSS+ WNLPYL+TLDLS N+F G IP SLS L  LRRL L
Sbjct: 82  VSGSSRVTELSLDQAGYSGTLSSITWNLPYLQTLDLSNNYFYGQIPESLSNLTQLRRLGL 141

Query: 42  SRNSFTGAIPASLG 1
           SRN   G IP S+G
Sbjct: 142 SRNLLYGEIPTSIG 155


>ref|XP_002280730.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710 [Vitis vinifera]
           gi|302142590|emb|CBI19793.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  194 bits (493), Expect = 1e-47
 Identities = 90/134 (67%), Positives = 110/134 (82%)
 Frame = -3

Query: 402 IKGDSRTHWGDIQVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDIV 223
           I GDSRTH GDIQ+LK  K   +P S+TPGSC+SSWDF +DPCD+++S+ FTCGFRCD +
Sbjct: 26  ITGDSRTHSGDIQILKDFKNGLNPGSITPGSCLSSWDFSVDPCDYLFSDRFTCGFRCDRL 85

Query: 222 VSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLAL 43
           V+  SRVTEI+LD+AGYTG+LSS  WNLP+L+ LDLS+N F+GSIP+S S L  LRRL L
Sbjct: 86  VAGASRVTEITLDQAGYTGTLSSSTWNLPFLQFLDLSDNSFSGSIPDSFSNLTRLRRLTL 145

Query: 42  SRNSFTGAIPASLG 1
           SRNSF+G IP SLG
Sbjct: 146 SRNSFSGEIPNSLG 159


>ref|XP_004146484.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Cucumis sativus]
           gi|449526138|ref|XP_004170071.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At4g36180-like [Cucumis sativus]
          Length = 417

 Score =  191 bits (486), Expect = 7e-47
 Identities = 87/130 (66%), Positives = 107/130 (82%)
 Frame = -3

Query: 390 SRTHWGDIQVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDIVVSEK 211
           S+T+W D QVLKQLK   DP+S++ GSCV SWDF LDPCD ++S+ FTCGFRCD VVS  
Sbjct: 21  SKTYWEDTQVLKQLKNALDPTSISSGSCVDSWDFSLDPCDSLFSQKFTCGFRCDAVVSGV 80

Query: 210 SRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLALSRNS 31
           SRVTE++LD+AGY+GSLSSVFWNLP+L+TLDLS NFF+GSIP+S S L  LR L+LS N 
Sbjct: 81  SRVTELNLDQAGYSGSLSSVFWNLPFLQTLDLSNNFFSGSIPDSFSNLTRLRSLSLSTNM 140

Query: 30  FTGAIPASLG 1
           F+G +P S+G
Sbjct: 141 FSGEVPPSIG 150


Top