BLASTX nr result

ID: Coptis23_contig00032299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032299
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853...   131   5e-29
ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group] g...   121   5e-26
gb|AFK48336.1| unknown [Lotus japonicus]                              120   9e-26
ref|XP_002525915.1| conserved hypothetical protein [Ricinus comm...   118   4e-25

>ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853072 [Vitis vinifera]
           gi|297737443|emb|CBI26644.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/93 (69%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = -2

Query: 283 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACLRCKGS 104
           MENITASELAG GVGTLL CATIAAP+VD+FISASQR SLGMCKKCGDL++IAC +CKG 
Sbjct: 1   MENITASELAGFGVGTLLLCATIAAPRVDSFISASQRRSLGMCKKCGDLKMIACSKCKGV 60

Query: 103 GLVKSNA-LNFSLVDDIFQSLGAQKTNERSIAC 8
           G VK+ A  +F+LVDD++QS    ++  RS AC
Sbjct: 61  GSVKAGAPFSFNLVDDLYQSFWGDESKVRSTAC 93


>ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|222873115|gb|EEF10246.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/94 (62%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
 Frame = -2

Query: 283 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACLRCKGS 104
           M N+T+SE+AG GVG LL CATI+APK+D+FISASQR+SLGMCK+CGDLR+IAC  CKG+
Sbjct: 1   MNNLTSSEVAGFGVGALLLCATISAPKIDSFISASQRSSLGMCKRCGDLRMIACSGCKGT 60

Query: 103 GLVK-SNALNFSLVDDIFQSLGAQKTNERSIACS 5
           GLVK   AL+F+ +DD+++SLG   +  ++I CS
Sbjct: 61  GLVKEGGALSFTFIDDMYESLGGD-SKVKTIRCS 93


>ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group]
           gi|41469078|gb|AAS07052.1| expressed protein [Oryza
           sativa Japonica Group] gi|108708805|gb|ABF96600.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113548833|dbj|BAF12276.1| Os03g0414400 [Oryza sativa
           Japonica Group] gi|125544312|gb|EAY90451.1| hypothetical
           protein OsI_12037 [Oryza sativa Indica Group]
           gi|125586657|gb|EAZ27321.1| hypothetical protein
           OsJ_11261 [Oryza sativa Japonica Group]
           gi|215704738|dbj|BAG94766.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765188|dbj|BAG86885.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 111

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/95 (58%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = -2

Query: 283 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACLRCKGS 104
           ME +T+SE+AG GVG LL CATIAA +VD FI++SQRTSLGMCKKCGDLR++AC +CKG 
Sbjct: 1   MEGLTSSEIAGFGVGALLVCATIAAQRVDGFIASSQRTSLGMCKKCGDLRIVACSQCKGV 60

Query: 103 GLVKSNAL-NFSLVDDIFQSLGAQKTNERSIACSN 2
           G V+   L  F ++DDI++SLGA+      + C+N
Sbjct: 61  GSVRKGGLFTFGMLDDIYESLGAETKTSNLVPCTN 95


>gb|AFK48336.1| unknown [Lotus japonicus]
          Length = 110

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/93 (60%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = -2

Query: 283 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACLRCKGS 104
           M+NITASE+AGLGVG LL  ATIAAPK+DAF S+SQR+SLGMCK+CG++R +AC RCKG+
Sbjct: 1   MDNITASEIAGLGVGVLLLSATIAAPKIDAFFSSSQRSSLGMCKRCGNIRRLACSRCKGT 60

Query: 103 GLVKSNAL-NFSLVDDIFQSLGAQKTNERSIAC 8
           G VK   L   +LVDD+++++G +++  + IAC
Sbjct: 61  GFVKEGGLFGINLVDDLYETIGNRESTVKQIAC 93


>ref|XP_002525915.1| conserved hypothetical protein [Ricinus communis]
           gi|223534744|gb|EEF36435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/84 (63%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = -2

Query: 283 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACLRCKGS 104
           M NITASE+AGLGVG+LL C  IAAPK+D+FIS+SQR+SLGMCK CGDLR++AC +C+G 
Sbjct: 1   MNNITASEIAGLGVGSLLLCCAIAAPKIDSFISSSQRSSLGMCKTCGDLRMVACSKCRGI 60

Query: 103 GLVKSNA-LNFSLVDDIFQSLGAQ 35
           G+VK++   +F+++DD++QSLG +
Sbjct: 61  GVVKADGPFSFNMMDDLYQSLGGE 84


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