BLASTX nr result

ID: Coptis23_contig00032281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032281
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19805.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Popul...    80   1e-13
ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255...    77   1e-12
ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Popu...    74   1e-11
ref|XP_004164443.1| PREDICTED: uncharacterized protein LOC101225...    69   4e-10

>emb|CBI19805.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 7/70 (10%)
 Frame = -1

Query: 232 DDEPIGSLFKLKKSRNPRKVKSSGLNAG-------KNVEVRGENSVIRNEDLGGMDDTLA 74
           DDEPIGS+FKL++  NP+KVK  GL++G       K+VE R E  V  +E+LGGMDDTLA
Sbjct: 25  DDEPIGSIFKLRRQTNPKKVKL-GLDSGGKTGEKLKSVEARAEKLVGEDEELGGMDDTLA 83

Query: 73  SFRKKLKGPK 44
           SFRKKL+GPK
Sbjct: 84  SFRKKLRGPK 93


>ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Populus trichocarpa]
           gi|222857150|gb|EEE94697.1| hypothetical protein
           POPTRDRAFT_73001 [Populus trichocarpa]
          Length = 1669

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/71 (61%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -1

Query: 238 DSDD-EPIGSLFKLKKSRNPRKVKSSGLNAGKNVEVRGENSVIRNEDLGGMDDTLASFRK 62
           DSDD EPIGSLF+LK+ RNP+KVK       + +EVR +  V  +EDLGGMDDTLASF+K
Sbjct: 51  DSDDNEPIGSLFRLKRPRNPKKVKV----VLEKIEVREDKLVTEDEDLGGMDDTLASFKK 106

Query: 61  KLKGPKVGKSS 29
           KLK PK G  S
Sbjct: 107 KLKAPKKGLGS 117


>ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255769 [Vitis vinifera]
          Length = 2145

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/63 (61%), Positives = 46/63 (73%)
 Frame = -1

Query: 232 DDEPIGSLFKLKKSRNPRKVKSSGLNAGKNVEVRGENSVIRNEDLGGMDDTLASFRKKLK 53
           DDEPIGS+FKL++  NP+KV         NVE R E  V  +E+LGGMDDTLASFRKKL+
Sbjct: 25  DDEPIGSIFKLRRQTNPKKV---------NVEARAEKLVGEDEELGGMDDTLASFRKKLR 75

Query: 52  GPK 44
           GPK
Sbjct: 76  GPK 78


>ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Populus trichocarpa]
           gi|222842453|gb|EEE80000.1| hypothetical protein
           POPTRDRAFT_643019 [Populus trichocarpa]
          Length = 1655

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = -1

Query: 238 DSDD-EPIGSLFKLKKSRNPRKVKSSGLNAGKNVEVRGENSVIRNEDLGGMDDTLASFRK 62
           DSDD EPIGSLF+LK+ RNP+K K  GL   + VEVR      ++EDLGGMDDTLASF+K
Sbjct: 52  DSDDNEPIGSLFRLKRPRNPKKAKV-GL---EKVEVREA----KDEDLGGMDDTLASFKK 103

Query: 61  KLKGPK 44
           KLKGPK
Sbjct: 104 KLKGPK 109


>ref|XP_004164443.1| PREDICTED: uncharacterized protein LOC101225931 [Cucumis sativus]
          Length = 1886

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/69 (59%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
 Frame = -1

Query: 238 DSD-DEPIGSLFKLKKSRNPRKVK---SSGLNAGKNVEVRGENSVIRNEDLGGMDDTLAS 71
           DSD DEPIGSL KLK+SRN +K K     G    K V+ +G    ++ ED GGMDDTLAS
Sbjct: 22  DSDVDEPIGSLLKLKRSRNSKKTKLNVDDGGGRDKMVDKKGAKLPVQ-EDFGGMDDTLAS 80

Query: 70  FRKKLKGPK 44
           FRKKLK PK
Sbjct: 81  FRKKLKRPK 89


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