BLASTX nr result

ID: Coptis23_contig00032278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032278
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17739.1| unknown [Picea sitchensis]                              56   3e-06
ref|NP_001234620.1| beta-mannosidase enzyme precursor [Solanum l...    55   8e-06

>gb|ABR17739.1| unknown [Picea sitchensis]
          Length = 505

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -1

Query: 81  QAYSFWLYMVPWGLYKAVTYIKEHYGH 1
           +A S+WLY+VPWGLYKAVTYIKEHYG+
Sbjct: 381 KANSYWLYIVPWGLYKAVTYIKEHYGN 407


>ref|NP_001234620.1| beta-mannosidase enzyme precursor [Solanum lycopersicum]
           gi|17226270|gb|AAL37714.1|AF403444_1 beta-mannosidase
           enzyme [Solanum lycopersicum]
           gi|17226296|gb|AAL37719.1|AF413204_1 beta-mannosidase
           [Solanum lycopersicum]
          Length = 514

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 19/27 (70%), Positives = 26/27 (96%)
 Frame = -1

Query: 81  QAYSFWLYMVPWGLYKAVTYIKEHYGH 1
           +A+S+WLY+VPWGLYKA+ Y+KEHYG+
Sbjct: 388 RAHSYWLYIVPWGLYKAINYVKEHYGN 414


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