BLASTX nr result

ID: Coptis23_contig00032265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032265
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527736.1| PREDICTED: tetratricopeptide repeat protein ...   117   7e-25
ref|XP_003550305.1| PREDICTED: tetratricopeptide repeat protein ...   117   1e-24
emb|CBI19400.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002285329.1| PREDICTED: tetratricopeptide repeat protein ...   116   2e-24
emb|CAN72853.1| hypothetical protein VITISV_013944 [Vitis vinifera]   116   2e-24

>ref|XP_003527736.1| PREDICTED: tetratricopeptide repeat protein 7B-like [Glycine max]
          Length = 715

 Score =  117 bits (294), Expect = 7e-25
 Identities = 53/79 (67%), Positives = 65/79 (82%)
 Frame = -3

Query: 240 KECRVIIDTVEAALPNGLLDSFAEDCKLQEILHKSLELLPSLWKQAGFLDEAIAAYRLAL 61
           KECR+I+DTVE+ALPNG+ +   E CKLQE+ HK+LEL PSLW +AGFLDEA+ AYR AL
Sbjct: 155 KECRIILDTVESALPNGMPEGIGEGCKLQEMFHKALELFPSLWIKAGFLDEAVTAYRRAL 214

Query: 60  SKPWNLHSQKLATIQKDLA 4
            KPWNL  +KLA ++KDLA
Sbjct: 215 VKPWNLEPRKLAAVEKDLA 233


>ref|XP_003550305.1| PREDICTED: tetratricopeptide repeat protein 7B-like [Glycine max]
          Length = 711

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/79 (64%), Positives = 65/79 (82%)
 Frame = -3

Query: 240 KECRVIIDTVEAALPNGLLDSFAEDCKLQEILHKSLELLPSLWKQAGFLDEAIAAYRLAL 61
           KECR+++DTVE+ALPNG+ +   EDCKLQE+ H++LELLP+LW +AG LDE + AYR AL
Sbjct: 155 KECRIVVDTVESALPNGMPEGIGEDCKLQEMFHEALELLPNLWMKAGLLDEVVTAYRRAL 214

Query: 60  SKPWNLHSQKLATIQKDLA 4
            KPWNL  Q+LA +QKDLA
Sbjct: 215 VKPWNLEPQRLACVQKDLA 233


>emb|CBI19400.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/79 (65%), Positives = 67/79 (84%)
 Frame = -3

Query: 240 KECRVIIDTVEAALPNGLLDSFAEDCKLQEILHKSLELLPSLWKQAGFLDEAIAAYRLAL 61
           KEC++I+DTVE+ALPNG+ +   EDCKLQE+ HK+LELLP LW +AG LDE+IAAYR AL
Sbjct: 154 KECKIILDTVESALPNGMPEGIGEDCKLQEMFHKALELLPKLWTKAGCLDESIAAYRQAL 213

Query: 60  SKPWNLHSQKLATIQKDLA 4
            +PWNL  ++LA++QKDLA
Sbjct: 214 VRPWNLDPRRLASVQKDLA 232


>ref|XP_002285329.1| PREDICTED: tetratricopeptide repeat protein 7A-like [Vitis
           vinifera]
          Length = 705

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/79 (65%), Positives = 67/79 (84%)
 Frame = -3

Query: 240 KECRVIIDTVEAALPNGLLDSFAEDCKLQEILHKSLELLPSLWKQAGFLDEAIAAYRLAL 61
           KEC++I+DTVE+ALPNG+ +   EDCKLQE+ HK+LELLP LW +AG LDE+IAAYR AL
Sbjct: 154 KECKIILDTVESALPNGMPEGIGEDCKLQEMFHKALELLPKLWTKAGCLDESIAAYRQAL 213

Query: 60  SKPWNLHSQKLATIQKDLA 4
            +PWNL  ++LA++QKDLA
Sbjct: 214 VRPWNLDPRRLASVQKDLA 232


>emb|CAN72853.1| hypothetical protein VITISV_013944 [Vitis vinifera]
          Length = 814

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/79 (65%), Positives = 67/79 (84%)
 Frame = -3

Query: 240 KECRVIIDTVEAALPNGLLDSFAEDCKLQEILHKSLELLPSLWKQAGFLDEAIAAYRLAL 61
           KEC++I+DTVE+ALPNG+ +   EDCKLQE+ HK+LELLP LW +AG LDE+IAAYR AL
Sbjct: 278 KECKIILDTVESALPNGMPEGIGEDCKLQEMFHKALELLPKLWTKAGCLDESIAAYRQAL 337

Query: 60  SKPWNLHSQKLATIQKDLA 4
            +PWNL  ++LA++QKDLA
Sbjct: 338 VRPWNLDPRRLASVQKDLA 356


Top