BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032258
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    68   9e-10
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    67   1e-09
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    66   3e-09
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    66   3e-09

>ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|222871275|gb|EEF08406.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = -3

Query: 270 GQCKDGLYP--LSSAHPVPRAFAAQSSSLWHSRLGHPSSTVLSFMASNKMLESDFRFTKS 97
           G CKDGLYP  LSS    P+A A+  SS+WH+RLGH SS V  F   +  + S   F  S
Sbjct: 347 GPCKDGLYPFNLSSVFTSPQALASVHSSIWHNRLGHSSSNV--FARLSPTINSKLSF-PS 403

Query: 96  FCKGCALGKSTHLPFVSNKISATIPFYL 13
           F + CAL KS  LPF SNK    + F L
Sbjct: 404 FYRDCALNKSHQLPFNSNKRLLPLLFIL 431


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
 Frame = -3

Query: 252 LYPLSSAHPVPRA--FAAQSSSLWHSRLGHPSSTVLSFMASNKMLESDFRFTKSFCKGCA 79
           LY L  A P   A  F AQSS+LWH RLGHPSS  +  +    +L    +   S C  C 
Sbjct: 468 LYTLPIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLHKLAILPCT-KIDHSLCHACK 526

Query: 78  LGKSTHLPFVSNKISATIPFYLVHSD 1
           LGK T LPF  ++ S + PF LVH D
Sbjct: 527 LGKHTRLPFSRSQSSTSSPFELVHCD 552


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
 Frame = -3

Query: 270 GQCKDGLYPLSSAHPVPRAFAAQSSSL--------WHSRLGHPSSTVL-SFMASNKMLES 118
           G  ++GLYPL+      ++    S+++        WHSRLGHPSS +  S   SNK+   
Sbjct: 425 GVVENGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVK 484

Query: 117 DFRFTKSFCKGCALGKSTHLPFVSNKISATIPFYLVHSD 1
                  FC  C LGK+  LPF  +   +++P  L+HSD
Sbjct: 485 GSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSD 523


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -3

Query: 270 GQCKDGLYPLSSAHPVPRAFAA--QSSSLWHSRLGHPSSTVLSFMASNKMLESDFRFTK- 100
           G+C+ GLYPL S  P  + FAA   S S WH RLGHPSS ++  + S+  L       K 
Sbjct: 299 GRCERGLYPLKS-FPNKQVFAAIKLSPSQWHCRLGHPSSVIVQQVLSHNNLPCVSESNKH 357

Query: 99  SFCKGCALGKSTHLPFVSNKISATIPFYLVHSD 1
           S C  C  GKS  LP+  +   ++ P  L+HSD
Sbjct: 358 SVCDACQKGKSHQLPYSKSLSRSSAPLELIHSD 390


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -3

Query: 270 GQCKDGLYPLSSAHPVPRAFAA--QSSSLWHSRLGHPSSTVLSFMASNKMLESDFRFTK- 100
           G+C+ GLYPL S  P  + FAA   S S WH RLGHPSS ++  + S+  L       K 
Sbjct: 372 GRCERGLYPLKS-FPNKQVFAAIKLSPSQWHCRLGHPSSVIVQQVLSHNNLPCVSESNKH 430

Query: 99  SFCKGCALGKSTHLPFVSNKISATIPFYLVHSD 1
           S C  C  GKS  LP+  +   ++ P  L+HSD
Sbjct: 431 SVCDACQKGKSHQLPYSKSLSRSSAPLELIHSD 463