BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032255
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566499.1| exonuclease-like protein [Arabidopsis thaliana]...   114   3e-29
ref|XP_002300407.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-29
ref|XP_002518369.1| RNA exonuclease, putative [Ricinus communis]...   115   1e-28
ref|XP_002882912.1| hypothetical protein ARALYDRAFT_318283 [Arab...   109   5e-28
emb|CAN66232.1| hypothetical protein VITISV_032253 [Vitis vinifera]   109   2e-27

>ref|NP_566499.1| exonuclease-like protein [Arabidopsis thaliana]
           gi|21593535|gb|AAM65502.1| exonuclease, putative
           [Arabidopsis thaliana] gi|90186238|gb|ABD91495.1|
           At3g15080 [Arabidopsis thaliana]
           gi|110737668|dbj|BAF00773.1| putative exonuclease
           [Arabidopsis thaliana] gi|195971099|gb|ACG60894.1|
           exonuclease domain-containing protein [Arabidopsis
           thaliana] gi|332642093|gb|AEE75614.1| exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 275

 Score =  114 bits (286), Expect(2) = 3e-29
 Identities = 55/79 (69%), Positives = 63/79 (79%)
 Frame = -3

Query: 370 AKDFGDVQTKVAELVKGRILVGHALHNDFKALLLSHPRNHIRDTSEYQPFLKEGRRRALK 191
           AKDF   QTKVAEL+KG+ILVGHALHND KALLL+HP+  IRDT EYQPFLK   R++LK
Sbjct: 143 AKDFRVAQTKVAELIKGKILVGHALHNDLKALLLTHPKKDIRDTGEYQPFLKGKTRKSLK 202

Query: 190 SLALEFLNAKIQDGAHCPV 134
            LA E L A IQ+G HCP+
Sbjct: 203 HLASEILGADIQNGEHCPI 221



 Score = 38.9 bits (89), Expect(2) = 3e-29
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -1

Query: 471 ERVVDFRTTISGIRPRDMRK 412
           E VVDFRT+ISGIRPRD+RK
Sbjct: 123 EHVVDFRTSISGIRPRDLRK 142


>ref|XP_002300407.1| predicted protein [Populus trichocarpa] gi|222847665|gb|EEE85212.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  115 bits (287), Expect(2) = 3e-29
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = -3

Query: 370 AKDFGDVQTKVAELVKGRILVGHALHNDFKALLLSHPRNHIRDTSEYQPFLKEGRRRALK 191
           A+DF   Q KVA L+KGRILVGHAL ND KALLL HP+  +RDTSEYQPFLK  RR+AL+
Sbjct: 141 ARDFSTAQKKVAVLIKGRILVGHALSNDLKALLLGHPKKDLRDTSEYQPFLKGRRRKALR 200

Query: 190 SLALEFLNAKIQDGAHCPV 134
            LA EFL AKIQ G HCP+
Sbjct: 201 HLAAEFLGAKIQSGEHCPI 219



 Score = 38.5 bits (88), Expect(2) = 3e-29
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 471 ERVVDFRTTISGIRPRDMRK 412
           ERV DFRT ISGIRPRD+RK
Sbjct: 121 ERVADFRTQISGIRPRDLRK 140


>ref|XP_002518369.1| RNA exonuclease, putative [Ricinus communis]
           gi|223542464|gb|EEF44005.1| RNA exonuclease, putative
           [Ricinus communis]
          Length = 299

 Score =  115 bits (288), Expect(2) = 1e-28
 Identities = 56/79 (70%), Positives = 62/79 (78%)
 Frame = -3

Query: 370 AKDFGDVQTKVAELVKGRILVGHALHNDFKALLLSHPRNHIRDTSEYQPFLKEGRRRALK 191
           AKDF  VQ KVAEL++GRILVGHAL ND K LLL HP+  +RDT EYQPFLKE RRRAL+
Sbjct: 166 AKDFPAVQKKVAELIRGRILVGHALSNDLKVLLLCHPKKDLRDTVEYQPFLKERRRRALR 225

Query: 190 SLALEFLNAKIQDGAHCPV 134
            LA EFL  KIQDG HC +
Sbjct: 226 HLAAEFLGVKIQDGEHCSI 244



 Score = 35.8 bits (81), Expect(2) = 1e-28
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 471 ERVVDFRTTISGIRPRDMRK 412
           ERVVDFRT ISGIRP+ +RK
Sbjct: 146 ERVVDFRTKISGIRPQHLRK 165


>ref|XP_002882912.1| hypothetical protein ARALYDRAFT_318283 [Arabidopsis lyrata subsp.
           lyrata] gi|297328752|gb|EFH59171.1| hypothetical protein
           ARALYDRAFT_318283 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  109 bits (273), Expect(2) = 5e-28
 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 5/84 (5%)
 Frame = -3

Query: 370 AKDFGDVQTKVAELVKGRILVGHALHNDFKALLLSHPRNHIRDTSEYQPFL-----KEGR 206
           AKDF   QTKVAEL+KG+ILVGHALHND KALLL+HP+  IRDT+EYQPFL     ++  
Sbjct: 165 AKDFRVAQTKVAELIKGKILVGHALHNDLKALLLTHPKKDIRDTAEYQPFLNNLSNRDKT 224

Query: 205 RRALKSLALEFLNAKIQDGAHCPV 134
           R++LK LA E L A IQ+G HCP+
Sbjct: 225 RKSLKHLAAEILGADIQNGEHCPI 248



 Score = 39.7 bits (91), Expect(2) = 5e-28
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 471 ERVVDFRTTISGIRPRDMRK 412
           ERVVDFRT ISGIRPRD+RK
Sbjct: 145 ERVVDFRTHISGIRPRDLRK 164


>emb|CAN66232.1| hypothetical protein VITISV_032253 [Vitis vinifera]
          Length = 288

 Score =  109 bits (273), Expect(2) = 2e-27
 Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = -3

Query: 376 SAAKDFGDVQTKVAELVKGRILVGHALHNDFKALLLSHPRNHIRDTSEYQPFLKEGRRR- 200
           +AAKDF  VQ +VAEL+KGR+LVGHAL ND KALLLSHP+  +RDTSE + FLKE RRR 
Sbjct: 152 AAAKDFQTVQRQVAELIKGRLLVGHALRNDLKALLLSHPKVDMRDTSECELFLKEERRRV 211

Query: 199 ALKSLALEFLNAKIQDGAHCPV 134
           AL+ LA EFL  KIQ+G HCPV
Sbjct: 212 ALRHLAAEFLGVKIQNGEHCPV 233



 Score = 37.7 bits (86), Expect(2) = 2e-27
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = -1

Query: 471 ERVVDFRTTISGIRPRDMRKE 409
           E VVDFRT ISGIRPRD++KE
Sbjct: 122 EWVVDFRTEISGIRPRDLKKE 142