BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032239
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865779.1| nucleotide binding protein [Arabidopsis lyra...   104   5e-23
ref|XP_002511279.1| Protein tipD, putative [Ricinus communis] gi...    99   4e-22
ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max]        100   5e-21
ref|NP_199834.2| transducin/WD40 domain-containing protein [Arab...   103   1e-20
dbj|BAB09394.1| unnamed protein product [Arabidopsis thaliana]        103   1e-20

>ref|XP_002865779.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311614|gb|EFH42038.1| nucleotide binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score =  104 bits (259), Expect(2) = 5e-23
 Identities = 52/72 (72%), Positives = 59/72 (81%)
 Frame = +3

Query: 81  LSRRRRPFVSQGSEWKEKAEKF*QELQRCYKAQARLSEQLVVEVAESRTSKTIAQEKEVI 260
           +S   RP +SQGSEWKEK EK   ELQ+CYKAQ+RLSEQLV+EVAESRTSK I QEKE+ 
Sbjct: 33  ISALSRPIISQGSEWKEKTEKLETELQQCYKAQSRLSEQLVIEVAESRTSKAILQEKELF 92

Query: 261 IADLQKEVTQAR 296
           I DLQKE+TQ R
Sbjct: 93  INDLQKELTQRR 104



 Score = 28.1 bits (61), Expect(2) = 5e-23
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 13 VIQESSGRSSYKTCFEKALRKRHFLEEGA 99
          ++QE     + K    +ALRKRH LEEGA
Sbjct: 1  MLQEEKAMEAIKDAL-RALRKRHLLEEGA 28


>ref|XP_002511279.1| Protein tipD, putative [Ricinus communis]
           gi|223550394|gb|EEF51881.1| Protein tipD, putative
           [Ricinus communis]
          Length = 520

 Score = 99.4 bits (246), Expect(3) = 4e-22
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = +3

Query: 96  RPFVSQGSEWKEKAEKF*QELQRCYKAQARLSEQLVVEVAESRTSKTIAQEKEVIIADLQ 275
           RP +SQGSEWKEKAE    ELQ+CYKAQ+RLSEQLVVEVAE+R SK   QEKE +IADL+
Sbjct: 42  RPIISQGSEWKEKAEALELELQQCYKAQSRLSEQLVVEVAETRASKASLQEKETVIADLE 101

Query: 276 KEVTQAR 296
           KE+TQ R
Sbjct: 102 KELTQIR 108



 Score = 27.7 bits (60), Expect(3) = 4e-22
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 61 KALRKRHFLEEGA 99
          KALRKRH LEEGA
Sbjct: 20 KALRKRHLLEEGA 32



 Score = 22.3 bits (46), Expect(3) = 4e-22
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 5  NLL*FRSRRDEAAIKHALKKLCER 76
          N+  +R      AIKHALK L +R
Sbjct: 2  NIFRYREEVARKAIKHALKALRKR 25


>ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max]
          Length = 514

 Score =  100 bits (249), Expect(2) = 5e-21
 Identities = 51/67 (76%), Positives = 56/67 (83%)
 Frame = +3

Query: 96  RPFVSQGSEWKEKAEKF*QELQRCYKAQARLSEQLVVEVAESRTSKTIAQEKEVIIADLQ 275
           RP VSQGSEWKEKAE    ELQ+CYKAQ+RLSEQLVVEVAESR SKT  QEKE  +ADLQ
Sbjct: 43  RPIVSQGSEWKEKAENLQMELQQCYKAQSRLSEQLVVEVAESRASKTSLQEKENALADLQ 102

Query: 276 KEVTQAR 296
           KE+T+ R
Sbjct: 103 KELTELR 109



 Score = 25.4 bits (54), Expect(2) = 5e-21
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 61 KALRKRHFLEEGA 99
          KALRKRH LEE A
Sbjct: 21 KALRKRHLLEEAA 33


>ref|NP_199834.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|40823395|gb|AAR92280.1| At5g50230 [Arabidopsis
           thaliana] gi|56381931|gb|AAV85684.1| At5g50230
           [Arabidopsis thaliana] gi|332008531|gb|AED95914.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 509

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = +3

Query: 81  LSRRRRPFVSQGSEWKEKAEKF*QELQRCYKAQARLSEQLVVEVAESRTSKTIAQEKEVI 260
           +S   +P +SQGSEWKEK EK   ELQ+CYKAQ+RLSEQLV+EVAESRTSK I QEKE++
Sbjct: 33  ISALSKPLISQGSEWKEKTEKLETELQQCYKAQSRLSEQLVIEVAESRTSKAILQEKELL 92

Query: 261 IADLQKEVTQAR 296
           I DLQKE+TQ R
Sbjct: 93  INDLQKELTQRR 104


>dbj|BAB09394.1| unnamed protein product [Arabidopsis thaliana]
          Length = 515

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = +3

Query: 81  LSRRRRPFVSQGSEWKEKAEKF*QELQRCYKAQARLSEQLVVEVAESRTSKTIAQEKEVI 260
           +S   +P +SQGSEWKEK EK   ELQ+CYKAQ+RLSEQLV+EVAESRTSK I QEKE++
Sbjct: 39  ISALSKPLISQGSEWKEKTEKLETELQQCYKAQSRLSEQLVIEVAESRTSKAILQEKELL 98

Query: 261 IADLQKEVTQAR 296
           I DLQKE+TQ R
Sbjct: 99  INDLQKELTQRR 110