BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032229
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
emb|CBI32451.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   132   2e-29
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/134 (59%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   ALLAEQVYKLVKQHHPIPKQLSSHFTPQAASHFLLNSQFNQTLTLKFLNWATPHSFFTSH 182
           ALL ++   L+K H      LSS FTPQ+AS+FLL SQF+QTLTLKFL WA  H FF SH
Sbjct: 31  ALLVDKAITLLKFHPHHLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFDSH 90

Query: 183 PKCISLHILTNFKLYKSAQSLAQTLISTHDD--DMSIFNCLKSTYHECNSSSAVFDLLIK 356
            KC+SLHILT FKLYK+AQ+LAQ L  +  D    SIF CLK +YH  NSSSAVFDL++K
Sbjct: 91  CKCLSLHILTRFKLYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVK 150

Query: 357 SYANLGMIKKGLVT 398
           SY++L MI + + T
Sbjct: 151 SYSHLNMIDQAVNT 164


>emb|CBI32451.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/123 (59%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   ALLAEQVYKLVKQHHPIPKQLSSHFTPQAASHFLLNSQFNQTLTLKFLNWATPHSFFTSH 182
           ALL ++   L+K H      LSS FTPQ+AS+FLL SQF+QTLTLKFL WA  H FF SH
Sbjct: 31  ALLVDKAITLLKFHPHHLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFDSH 90

Query: 183 PKCISLHILTNFKLYKSAQSLAQTLISTHDD--DMSIFNCLKSTYHECNSSSAVFDLLIK 356
            KC+SLHILT FKLYK+AQ+LAQ L  +  D    SIF CLK +YH  NSSSAVFDL++ 
Sbjct: 91  CKCLSLHILTRFKLYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVS 150

Query: 357 SYA 365
            ++
Sbjct: 151 GFS 153


>ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|222849505|gb|EEE87052.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  135 bits (339), Expect = 5e-30
 Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 2/132 (1%)
 Frame = +3

Query: 3   ALLAEQVYKLVKQHHPIPKQLSSHFTPQAASHFLLNSQFNQTLTLKFLNWATPHSFFTSH 182
           ALLAE+   L+K++      +SS  TP+ AS+ LL +Q ++TLTLKF+N+A PH FF  H
Sbjct: 21  ALLAEKALTLLKRYPYHLNSISSQITPELASYLLLQTQNDRTLTLKFINFAKPHQFFNPH 80

Query: 183 PKCISLHILTNFKLYKSAQSLAQTLISTHDDDMS--IFNCLKSTYHECNSSSAVFDLLIK 356
            KCI+LHILT FKLYK+AQ+LAQ L     D+     F CLK TY  CNSSSAVFDL++K
Sbjct: 81  CKCIALHILTKFKLYKTAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVK 140

Query: 357 SYANLGMIKKGL 392
           S + L  I+K L
Sbjct: 141 SCSYLNFIEKAL 152


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/132 (50%), Positives = 94/132 (71%), Gaps = 2/132 (1%)
 Frame = +3

Query: 3   ALLAEQVYKLVKQHHPIPKQLSSHFTPQAASHFLLNSQFNQTLTLKFLNWATPHSFFTSH 182
           ALLA++    +++H      LSSHFTPQA+S+ LL SQF+ +L LKFL+WA    FF+  
Sbjct: 21  ALLADKAIVYLRRHPEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQ 80

Query: 183 PKCISLHILTNFKLYKSAQSLAQTLISTHDDDM--SIFNCLKSTYHECNSSSAVFDLLIK 356
            KC++LHILT +KLYK+AQSLA+ ++    D+    +F CLK++Y++C SSSAVFDL++K
Sbjct: 81  CKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVK 140

Query: 357 SYANLGMIKKGL 392
           S A + +I K L
Sbjct: 141 SCARVNLINKAL 152


>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/132 (50%), Positives = 94/132 (71%), Gaps = 2/132 (1%)
 Frame = +3

Query: 3   ALLAEQVYKLVKQHHPIPKQLSSHFTPQAASHFLLNSQFNQTLTLKFLNWATPHSFFTSH 182
           ALLA++    +++H      LSSHFTPQA+S+ LL SQF+ +L LKFL+WA    FF+  
Sbjct: 21  ALLADKAIVYLRRHPEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQ 80

Query: 183 PKCISLHILTNFKLYKSAQSLAQTLISTHDDDM--SIFNCLKSTYHECNSSSAVFDLLIK 356
            KC++LHILT +KLYK+AQSLA+ ++    D+    +F CLK++Y++C SSSAVFDL++K
Sbjct: 81  CKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVK 140

Query: 357 SYANLGMIKKGL 392
           S A + +I K L
Sbjct: 141 SCARVNLINKAL 152