BLASTX nr result

ID: Coptis23_contig00032228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032228
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...   107   2e-21
emb|CAN64449.1| hypothetical protein VITISV_008912 [Vitis vinifera]    94   2e-17
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    92   2e-16
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    90   5e-16
emb|CAN83329.1| hypothetical protein VITISV_034016 [Vitis vinifera]    86   1e-14

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score =  107 bits (268), Expect = 2e-21
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
 Frame = +2

Query: 5   GENISLWRDNWIGEVIIENHIQDKRLLQKLKAPLSACIQGNHWKFPDSLKQILNSLGVDL 184
           G  I  W D W GE + E    ++ + ++    +   IQ   W  P ++     +L +  
Sbjct: 11  GRLIKFWEDAWCGEPLHETLNVNQDIYREYPQFVHDYIQNFRWHIPQTILVHYPALKLLA 70

Query: 185 SQLQLPDQHREDRRVWRQSTNGLFSVSSAHEAIRERANGPLWTKFLWSAEVLPRTHGIGW 364
            ++ +P + +ED+ +W  ++NG   +  ++    +  N   W K +WS ++ P    + W
Sbjct: 71  EKVTIPMEDKEDKLIWNHNSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDIPPSKSILTW 130

Query: 365 KILHGAMHTDKKLRARNFQLVSRCCICTEAEETQDHLLFECMFAQRCWELIAKNMQHHTK 544
           +++H  + TD+KL+ R  QL S C +C    ET  HL FEC FA R W   A  +     
Sbjct: 131 RLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIWCWFASVLDSSLH 190

Query: 545 IANREDMLIKC-RNESPLIHDLWRAAAIICLIAVWRNRN 658
             +  D+   C R  SP    + +A  +  +  +W NRN
Sbjct: 191 FQSIPDIWSVCDRGWSPQCKVVNQATIVNIISTIWYNRN 229


>emb|CAN64449.1| hypothetical protein VITISV_008912 [Vitis vinifera]
          Length = 496

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 28/257 (10%)
 Frame = +2

Query: 5   GENISLWRDNWIGEVIIENHIQDKRLLQKLKAPLSACIQG-------------------N 127
           G  +  W+D W G   + N+      L  + +   A ++                    N
Sbjct: 219 GRRVKFWKDIWWGNFALCNYFPS---LYAIASSKEAWVEEFWDTSGEEGVWSPRFSRPFN 275

Query: 128 HWKFPDSLKQILNSLGVDLSQLQLPDQHREDRRVWRQSTNGLFSVSSAHEAIRERANGPL 307
            W+  +  + +L   G  L  L       EDR +W+ ++NG+FSV S +  +  R  GP 
Sbjct: 276 DWEVEEVERLLLTIRGARLIPLM------EDRMMWKVTSNGIFSVKSLYNDLSSRRAGPF 329

Query: 308 WTKFLWSAEVLPRTHGIGWKILHGAMHTDKKLRARNFQLVSRCCICTEAEETQDHLLFEC 487
               +WS  V  +     WK   G + T  +L+ R + L +RC +C E EE+ DH+L  C
Sbjct: 330 PHGLIWSPSVPSKVSFFAWKASWGKVLTMDQLKKRGWALANRCFLCCEEEESIDHILIHC 389

Query: 488 MFAQRCWEL---------IAKNMQHHTKIANREDMLIKCRNESPLIHDLWRAAAIICLIA 640
             A+  WEL         +  +    T I  R  ML K   +      +W+AA +    A
Sbjct: 390 SRARALWELLFALFGVFWVLPSSARDTLIEWRGFMLGKKHRK------VWKAAPLCLFWA 443

Query: 641 VWRNRNGVLYGSKKSSV 691
           VW  RN + + ++  SV
Sbjct: 444 VWMERNRIAFDNEDFSV 460


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
 Frame = +2

Query: 269 AHEAIRERANGPLWTKFLWSAEVLPRTHGIGWKILHGAMHTDKKLRARNFQLVSRCCICT 448
           A++ I E  N  LW KFLW++ + P    I W++LH  + TD+ LR R   +VS CC C 
Sbjct: 23  AYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCM 82

Query: 449 EAEETQDHLLFECMFAQRCWELIAKNMQHHTKIANREDMLIK-CRNESPLIHDLWRAAAI 625
           ++ E+  H+ FEC    R W+ + K        ++   +LI+   + S L++++  +A I
Sbjct: 83  KSAESSQHIFFECHVTSRLWDWLGKGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAII 142

Query: 626 ICLIAVWRNRNGVLYGSKKSSVSSVMFQVRGAVKRAY 736
             + ++W  RN   + +K  +++++   +   VK ++
Sbjct: 143 HTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSF 179


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 16/269 (5%)
 Frame = +2

Query: 5    GENISLWRDNWIGEVIIENHIQDKRLLQ-KLKAPLSACIQGNHWKFPDSLKQILNSLGVD 181
            G+   +W D W+ +      +  +R +   LK          +W   + L+ +     V+
Sbjct: 928  GQKTFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTSRNWNL-NMLRDLFPWKDVE 986

Query: 182  LSQLQLPDQHREDRRVWRQSTNGLFSVSSAHEAIRERANGPLWTKF------------LW 325
            +   Q P   +ED   W  S NGL+SV + +E + ++ +  L+ +             +W
Sbjct: 987  IILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIW 1046

Query: 326  SAEVLPRTHGIGWKILHGAMHTDKKLRARNFQLVSRCCICTEAEETQDHLLFECMFAQRC 505
            +    P+     WK LHGA+  + +LR R  +    C +C    ET +H+LFEC  A++ 
Sbjct: 1047 NLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQV 1106

Query: 506  W---ELIAKNMQHHTKIANREDMLIKCRNESPLIHDLWRAAAIICLIAVWRNRNGVLYGS 676
            W    L +   +    +      LI    ++ L H L R  +   L  +W+NRN +L+  
Sbjct: 1107 WAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHL-RFVSPWILWFLWKNRNALLFEG 1165

Query: 677  KKSSVSSVMFQVRGAVKRAYDRSKKHMNN 763
            K S  ++++ +   A    +  ++ HM N
Sbjct: 1166 KGSITTTLVDKAYEAYHEWFS-AQTHMQN 1193


>emb|CAN83329.1| hypothetical protein VITISV_034016 [Vitis vinifera]
          Length = 329

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 19/240 (7%)
 Frame = +2

Query: 5   GENISLWRDNWIGEVIIENHIQDKRLLQKLKAPL------SACIQG----------NHWK 136
           G  +  W+D W G   + N       +   K         ++ ++G          N W+
Sbjct: 86  GRRVKFWKDIWWGNFALCNSFPSLYAIASSKEAWVEEFWDTSGVEGVWSPRFSRPFNDWE 145

Query: 137 FPDSLKQILNSLGVDLSQLQLPDQHREDRRVWRQSTNGLFSVSSAHEAIRERANGPLWTK 316
             +  + +L   G  L  L       EDR +W+ ++NG+FSV S +  +  R  G     
Sbjct: 146 VEEVERLLLTIRGARLIPLM------EDRMMWKVTSNGIFSVKSLYNDLSSRRAGLFPHG 199

Query: 317 FLWSAEVLPRTHGIGWKILHGAMHTDKKLRARNFQLVSRCCICTEAEETQDHLLFECMFA 496
            +WS  V  +     W+   G + T  +L+ R + L +RC +C E EE+ DH+L  C  A
Sbjct: 200 LIWSPSVPSKVSFFTWEASWGKVLTMDQLKKRGWALANRCFLCCEEEESIDHILIHCSRA 259

Query: 497 QRCWE-LIAKNMQHHTKIANREDMLIKCRN--ESPLIHDLWRAAAIICLIAVWRNRNGVL 667
           +  WE L A         ++ +D LI+ R          +W+AA++    AVW    G+L
Sbjct: 260 RALWEFLFALFGVFWVLPSSAKDTLIEWRGFMLGKKHRKVWKAASLCLFWAVWMEETGLL 319


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