BLASTX nr result

ID: Coptis23_contig00032223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032223
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
ref|XP_002531370.1| conserved hypothetical protein [Ricinus comm...   154   7e-36
ref|XP_003542023.1| PREDICTED: uncharacterized protein LOC100785...   141   5e-32
ref|XP_002881008.1| hypothetical protein ARALYDRAFT_320665 [Arab...   141   5e-32
ref|XP_002308143.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32

>ref|XP_002313448.1| predicted protein [Populus trichocarpa] gi|222849856|gb|EEE87403.1|
           predicted protein [Populus trichocarpa]
          Length = 807

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/119 (61%), Positives = 93/119 (78%)
 Frame = +1

Query: 13  LGSAFQTGLACTVVGYITLFGPLTLQHMLAFPALSYVTVILIVSEATLGDALRGCWNAVY 192
           L SAF+T LACT+VG  TL+GP +++H +AFPA SYVTVILIV++ATLGDAL GCW A+Y
Sbjct: 16  LASAFRTALACTIVGCTTLYGPASIRHHIAFPAFSYVTVILIVTDATLGDALHGCWLALY 75

Query: 193 GTVQGVLPAVFSLWVLGPARFSVTTIVIAVTLSTFAIILPESTHAIAKRIALAQVVILY 369
            TVQ V PA+ SLW++GPA  +  TI +AV L  F ++ PE TH +AKRIAL Q+VI+Y
Sbjct: 76  ATVQSVGPALLSLWLIGPAMLTSGTISLAVALGAFVVVFPEGTHLVAKRIALGQIVIVY 134


>ref|XP_002531370.1| conserved hypothetical protein [Ricinus communis]
           gi|223529030|gb|EEF31018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 805

 Score =  154 bits (389), Expect = 7e-36
 Identities = 73/119 (61%), Positives = 91/119 (76%)
 Frame = +1

Query: 13  LGSAFQTGLACTVVGYITLFGPLTLQHMLAFPALSYVTVILIVSEATLGDALRGCWNAVY 192
           L +AF+TGLACT+VG +TL+GP  L   +AFPA SYVTVILIV++AT GD L GCW A+Y
Sbjct: 20  LATAFRTGLACTIVGCLTLYGPSFLHQQIAFPAFSYVTVILIVTDATFGDTLHGCWLALY 79

Query: 193 GTVQGVLPAVFSLWVLGPARFSVTTIVIAVTLSTFAIILPESTHAIAKRIALAQVVILY 369
            T Q + PA+ SLW++GPARF+  TI +AV L  F + LPE TH IAKRIAL Q+VI+Y
Sbjct: 80  ATFQSLGPAMLSLWLIGPARFTSGTISLAVALGAFVVALPEGTHLIAKRIALGQIVIVY 138


>ref|XP_003542023.1| PREDICTED: uncharacterized protein LOC100785658 [Glycine max]
          Length = 784

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/125 (55%), Positives = 93/125 (74%), Gaps = 3/125 (2%)
 Frame = +1

Query: 4   RSRLGSAFQTGLACTVVGYITLFGPLTLQHMLAFPALSYVTVILIV-SEATLGDALRGCW 180
           R  L SAF+T LACT+VG +TL+GP ++  ++AFPA SYVT ILI+ ++A LGDALRGCW
Sbjct: 8   RECLSSAFRTALACTIVGCVTLYGPSSICTLVAFPAFSYVTAILIIINDAALGDALRGCW 67

Query: 181 NAVYGTVQGVLPAVFSLWVLGPARFSVTTIVIAVTLSTFAIIL--PESTHAIAKRIALAQ 354
            A+Y T Q + PA+ SLW +GP RFS  T   AV L+ F ++L  P+STH IAKR++L Q
Sbjct: 68  LALYATFQSMGPAMLSLWAVGPGRFSKATSAAAVALAAFVVVLPWPQSTHLIAKRVSLGQ 127

Query: 355 VVILY 369
           +V++Y
Sbjct: 128 IVLVY 132


>ref|XP_002881008.1| hypothetical protein ARALYDRAFT_320665 [Arabidopsis lyrata subsp.
           lyrata] gi|297326847|gb|EFH57267.1| hypothetical protein
           ARALYDRAFT_320665 [Arabidopsis lyrata subsp. lyrata]
          Length = 795

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/123 (55%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
 Frame = +1

Query: 4   RSRLGSAFQTGLACTVVGYITLFGPLTLQHMLAFPALSYVTVILIVSEATLGDALRGCWN 183
           R+ L SAF+T LACT+VG  TL+GP  +   +AFPA SYVTVILI+++ATLGD LRGCW 
Sbjct: 12  RTCLASAFRTALACTIVGSATLYGPEWINRHVAFPAFSYVTVILIITDATLGDTLRGCWL 71

Query: 184 AVYGTVQGVLPAVFSLWVLGPARFSVTTIVIAVTLSTFAIILP-ESTHAIAKRIALAQVV 360
           A+Y T Q V PA+ +L ++GPAR +  T  +A  L+ F ++LP  STH +AKRIAL Q+V
Sbjct: 72  ALYATCQSVGPAIITLKLIGPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIALGQIV 131

Query: 361 ILY 369
           ++Y
Sbjct: 132 LIY 134


>ref|XP_002308143.1| predicted protein [Populus trichocarpa] gi|222854119|gb|EEE91666.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/120 (55%), Positives = 88/120 (73%)
 Frame = +1

Query: 10  RLGSAFQTGLACTVVGYITLFGPLTLQHMLAFPALSYVTVILIVSEATLGDALRGCWNAV 189
           RL S+ +T LACT+VG  TL+GP  L+H LA+PA SYVT ILIVS+ATL D LRGCWNA+
Sbjct: 17  RLSSSLRTALACTIVGCTTLYGPARLRHFLAYPAFSYVTAILIVSDATLDDTLRGCWNAL 76

Query: 190 YGTVQGVLPAVFSLWVLGPARFSVTTIVIAVTLSTFAIILPESTHAIAKRIALAQVVILY 369
           Y T+Q ++  + +  V+GPARFS     +AV ++TF + LPEST  +AKRIA  Q VI++
Sbjct: 77  YATIQVMILCLLTFQVIGPARFSNVLAAVAVAITTFMVALPESTPLMAKRIAFGQAVIVF 136


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