BLASTX nr result

ID: Coptis23_contig00032218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032218
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...    89   4e-16
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple...    89   4e-16
ref|XP_003626606.1| Conserved oligomeric Golgi complex subunit [...    89   4e-16
ref|XP_002302674.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...    89   5e-16

>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 4-like [Cucumis sativus]
          Length = 751

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -1

Query: 217 SELLDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALRL 89
           SE+LDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAAL+L
Sbjct: 709 SEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 751


>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Cucumis sativus]
          Length = 751

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -1

Query: 217 SELLDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALRL 89
           SE+LDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAAL+L
Sbjct: 709 SEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 751


>ref|XP_003626606.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula]
           gi|87240849|gb|ABD32707.1| Conserved oligomeric Golgi
           complex component 4, related [Medicago truncatula]
           gi|355501621|gb|AES82824.1| Conserved oligomeric Golgi
           complex subunit [Medicago truncatula]
          Length = 747

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -1

Query: 217 SELLDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALRL 89
           SE+LDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAAL+L
Sbjct: 705 SEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 747


>ref|XP_002302674.1| predicted protein [Populus trichocarpa] gi|222844400|gb|EEE81947.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = -1

Query: 217 SELLDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALRL 89
           SE+LDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAAL+L
Sbjct: 135 SEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 177


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
            vinifera]
          Length = 1105

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = -1

Query: 217  SELLDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALRL 89
            SE+LDFWGENSGPMTWRLTPAEVRRVLGLR+DFKPEAIAAL+L
Sbjct: 1063 SEILDFWGENSGPMTWRLTPAEVRRVLGLRIDFKPEAIAALKL 1105


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