BLASTX nr result

ID: Coptis23_contig00032213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032213
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylas...   133   2e-29
emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]   133   2e-29
ref|XP_002516818.1| s-adenosylmethionine decarboxylase, putative...   129   3e-28
ref|XP_002314430.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002312726.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Vitis
           vinifera]
          Length = 350

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   FIFPKAQPSPHTSFREEVMYLEENLPSNLCFRKASVMPLKKPKSSHSWHVYSASDEHHLV 181
           FIFPKAQP PHTSFR+EV+YLE++LPS LC+RKASVMP K   SSHSWHV+SASDE H+V
Sbjct: 111 FIFPKAQPFPHTSFRDEVIYLEQSLPSTLCYRKASVMPSK--MSSHSWHVFSASDEPHMV 168

Query: 182 -QHIPDV-FTIEVCMTELDRFLARKFF 256
            QH+PDV +T+EVCMT+LDR LARKFF
Sbjct: 169 LQHMPDVLYTLEVCMTDLDRVLARKFF 195


>emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]
          Length = 350

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   FIFPKAQPSPHTSFREEVMYLEENLPSNLCFRKASVMPLKKPKSSHSWHVYSASDEHHLV 181
           FIFPKAQP PHTSFR+EV+YLE++LPS LC+RKASVMP K   SSHSWHV+SASDE H+V
Sbjct: 111 FIFPKAQPFPHTSFRDEVIYLEQSLPSTLCYRKASVMPSK--MSSHSWHVFSASDEPHMV 168

Query: 182 -QHIPDV-FTIEVCMTELDRFLARKFF 256
            QH+PDV +T+EVCMT+LDR LARKFF
Sbjct: 169 LQHMPDVLYTLEVCMTDLDRVLARKFF 195


>ref|XP_002516818.1| s-adenosylmethionine decarboxylase, putative [Ricinus communis]
           gi|223543906|gb|EEF45432.1| s-adenosylmethionine
           decarboxylase, putative [Ricinus communis]
          Length = 342

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/85 (70%), Positives = 72/85 (84%)
 Frame = +2

Query: 2   FIFPKAQPSPHTSFREEVMYLEENLPSNLCFRKASVMPLKKPKSSHSWHVYSASDEHHLV 181
           FIFPK+QP PHTSF+EEV+YLEE LPSNLC+RKASVMP K   +SHSWHV++ASD++H +
Sbjct: 113 FIFPKSQPFPHTSFKEEVIYLEETLPSNLCYRKASVMPSK--MTSHSWHVFTASDQNHFI 170

Query: 182 QHIPDVFTIEVCMTELDRFLARKFF 256
                ++TIEVCMTELDR LARKFF
Sbjct: 171 SQNHHLYTIEVCMTELDRVLARKFF 195


>ref|XP_002314430.1| predicted protein [Populus trichocarpa] gi|222863470|gb|EEF00601.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/85 (68%), Positives = 74/85 (87%)
 Frame = +2

Query: 2   FIFPKAQPSPHTSFREEVMYLEENLPSNLCFRKASVMPLKKPKSSHSWHVYSASDEHHLV 181
           FIFPKAQPSPHTSF+EEVM LE+ LP+NLC+RKASVMP K   +++SWHV++ASDE H++
Sbjct: 116 FIFPKAQPSPHTSFKEEVMCLEDALPNNLCYRKASVMPSK--TTTNSWHVFTASDESHII 173

Query: 182 QHIPDVFTIEVCMTELDRFLARKFF 256
            +  D++T+EVCMT+LDR LARKFF
Sbjct: 174 PNDHDIYTVEVCMTDLDRVLARKFF 198


>ref|XP_002312726.1| predicted protein [Populus trichocarpa] gi|222852546|gb|EEE90093.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/85 (69%), Positives = 73/85 (85%)
 Frame = +2

Query: 2   FIFPKAQPSPHTSFREEVMYLEENLPSNLCFRKASVMPLKKPKSSHSWHVYSASDEHHLV 181
           FIFPKAQP PHTSF+EEV+YLEE LP+NLC+RKASVMP K   ++HSWHV++ASD+ H++
Sbjct: 114 FIFPKAQPFPHTSFKEEVIYLEETLPTNLCYRKASVMPSK--MTTHSWHVFTASDQSHVI 171

Query: 182 QHIPDVFTIEVCMTELDRFLARKFF 256
               D++T+EVCMTELDR LARKFF
Sbjct: 172 P--KDIYTLEVCMTELDRVLARKFF 194


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