BLASTX nr result
ID: Coptis23_contig00032201
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00032201 (551 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228... 311 4e-83 ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220... 311 4e-83 ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu... 310 1e-82 ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2... 306 2e-81 ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254... 298 5e-79 >ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis sativus] Length = 958 Score = 311 bits (797), Expect = 4e-83 Identities = 143/183 (78%), Positives = 163/183 (89%) Frame = +1 Query: 1 SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180 SR+EVF+WG+G+NGRLGHGD+EDRKAPT++E LKDR VKSISCGSNFT SICIHKWVSGA Sbjct: 418 SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGA 477 Query: 181 DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360 DQSVCTGCRQ FGFTRKRHNCYNCGLVHCH+CSSKKAL+AALAPTPGKPHRVCDSCYAKL Sbjct: 478 DQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKL 537 Query: 361 KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540 K++EAGN +RK A RRS D +ERFDRG+VR SRILLSP+ E +KY ++KSV+PG + Sbjct: 538 KSAEAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSR 597 Query: 541 SES 549 S Sbjct: 598 PTS 600 >ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus] Length = 1075 Score = 311 bits (797), Expect = 4e-83 Identities = 143/183 (78%), Positives = 163/183 (89%) Frame = +1 Query: 1 SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180 SR+EVF+WG+G+NGRLGHGD+EDRKAPT++E LKDR VKSISCGSNFT SICIHKWVSGA Sbjct: 556 SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGA 615 Query: 181 DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360 DQSVCTGCRQ FGFTRKRHNCYNCGLVHCH+CSSKKAL+AALAPTPGKPHRVCDSCYAKL Sbjct: 616 DQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKL 675 Query: 361 KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540 K++EAGN +RK A RRS D +ERFDRG+VR SRILLSP+ E +KY ++KSV+PG + Sbjct: 676 KSAEAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSR 735 Query: 541 SES 549 S Sbjct: 736 PTS 738 >ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis] Length = 1097 Score = 310 bits (794), Expect = 1e-82 Identities = 141/183 (77%), Positives = 163/183 (89%) Frame = +1 Query: 1 SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180 SRSE++TWGKGANGRLGHGD EDR+ PT+VE LKDR VK+ISCGSNFTTSICIHKWVSGA Sbjct: 555 SRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSGA 614 Query: 181 DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360 DQSVC+GCRQ FGFTRKRHNCYNCGLVHCHACSSKKAL+AALAPTPGKPHRVCD+CYAKL Sbjct: 615 DQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYAKL 674 Query: 361 KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540 K S+ GN + +RK+ PRRSID RE+ DRGE +SR L SPS E +KY+++KSV+PG++ Sbjct: 675 KTSDTGNYN-INRKATTPRRSIDIREKMDRGEANTSRTLFSPSTEPIKYLEIKSVRPGMR 733 Query: 541 SES 549 SE+ Sbjct: 734 SEA 736 >ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa] Length = 1109 Score = 306 bits (783), Expect = 2e-81 Identities = 138/183 (75%), Positives = 163/183 (89%) Frame = +1 Query: 1 SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180 SRSEVFTWG+GANG+LGHGD EDRK PT+VE LK+R VK++SCG+NFT+SICIHKWVSGA Sbjct: 555 SRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICIHKWVSGA 614 Query: 181 DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360 DQSVC+GCRQ FGFTRKRHNCYNCGLVHCH CSSKKA++AALAPTPGKPHRVCDSCYAKL Sbjct: 615 DQSVCSGCRQAFGFTRKRHNCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKL 674 Query: 361 KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540 KA+E+GN S +RK+ PRRS+D RE+ +RGE R SRILLSP+ E +KY+++KS K G + Sbjct: 675 KAAESGNTSAINRKTTVPRRSMDIREKMERGEPRFSRILLSPTTEPIKYLEIKSGKQGAQ 734 Query: 541 SES 549 SE+ Sbjct: 735 SEA 737 >ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera] Length = 1082 Score = 298 bits (762), Expect = 5e-79 Identities = 140/178 (78%), Positives = 155/178 (87%) Frame = +1 Query: 1 SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180 SRSEVFTWG+GANGRLGHGD EDR++PT VE LKDR VKSISCGSNFT SICIHKWVSGA Sbjct: 557 SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGA 616 Query: 181 DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360 DQSVC+GCRQ FGFTRKRHNCYNCGLVHCHACSSKKAL+AALAPTPGKPHRVCD CYAKL Sbjct: 617 DQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKL 676 Query: 361 KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPG 534 KA+EAG+AS F+RK+ PRRSID+ R DRGEVRS+RIL+SP + Y + K + G Sbjct: 677 KAAEAGDASIFNRKNTVPRRSIDATIRSDRGEVRSARILMSPG--PINYFEFKPARLG 732