BLASTX nr result

ID: Coptis23_contig00032201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032201
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228...   311   4e-83
ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220...   311   4e-83
ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu...   310   1e-82
ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2...   306   2e-81
ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254...   298   5e-79

>ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  311 bits (797), Expect = 4e-83
 Identities = 143/183 (78%), Positives = 163/183 (89%)
 Frame = +1

Query: 1   SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180
           SR+EVF+WG+G+NGRLGHGD+EDRKAPT++E LKDR VKSISCGSNFT SICIHKWVSGA
Sbjct: 418 SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGA 477

Query: 181 DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360
           DQSVCTGCRQ FGFTRKRHNCYNCGLVHCH+CSSKKAL+AALAPTPGKPHRVCDSCYAKL
Sbjct: 478 DQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKL 537

Query: 361 KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540
           K++EAGN    +RK  A RRS D +ERFDRG+VR SRILLSP+ E +KY ++KSV+PG +
Sbjct: 538 KSAEAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSR 597

Query: 541 SES 549
             S
Sbjct: 598 PTS 600


>ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  311 bits (797), Expect = 4e-83
 Identities = 143/183 (78%), Positives = 163/183 (89%)
 Frame = +1

Query: 1    SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180
            SR+EVF+WG+G+NGRLGHGD+EDRKAPT++E LKDR VKSISCGSNFT SICIHKWVSGA
Sbjct: 556  SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGA 615

Query: 181  DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360
            DQSVCTGCRQ FGFTRKRHNCYNCGLVHCH+CSSKKAL+AALAPTPGKPHRVCDSCYAKL
Sbjct: 616  DQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKL 675

Query: 361  KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540
            K++EAGN    +RK  A RRS D +ERFDRG+VR SRILLSP+ E +KY ++KSV+PG +
Sbjct: 676  KSAEAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSR 735

Query: 541  SES 549
              S
Sbjct: 736  PTS 738


>ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223526683|gb|EEF28920.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1097

 Score =  310 bits (794), Expect = 1e-82
 Identities = 141/183 (77%), Positives = 163/183 (89%)
 Frame = +1

Query: 1    SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180
            SRSE++TWGKGANGRLGHGD EDR+ PT+VE LKDR VK+ISCGSNFTTSICIHKWVSGA
Sbjct: 555  SRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSGA 614

Query: 181  DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360
            DQSVC+GCRQ FGFTRKRHNCYNCGLVHCHACSSKKAL+AALAPTPGKPHRVCD+CYAKL
Sbjct: 615  DQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYAKL 674

Query: 361  KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540
            K S+ GN +  +RK+  PRRSID RE+ DRGE  +SR L SPS E +KY+++KSV+PG++
Sbjct: 675  KTSDTGNYN-INRKATTPRRSIDIREKMDRGEANTSRTLFSPSTEPIKYLEIKSVRPGMR 733

Query: 541  SES 549
            SE+
Sbjct: 734  SEA 736


>ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1|
            predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  306 bits (783), Expect = 2e-81
 Identities = 138/183 (75%), Positives = 163/183 (89%)
 Frame = +1

Query: 1    SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180
            SRSEVFTWG+GANG+LGHGD EDRK PT+VE LK+R VK++SCG+NFT+SICIHKWVSGA
Sbjct: 555  SRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICIHKWVSGA 614

Query: 181  DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360
            DQSVC+GCRQ FGFTRKRHNCYNCGLVHCH CSSKKA++AALAPTPGKPHRVCDSCYAKL
Sbjct: 615  DQSVCSGCRQAFGFTRKRHNCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKL 674

Query: 361  KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPGIK 540
            KA+E+GN S  +RK+  PRRS+D RE+ +RGE R SRILLSP+ E +KY+++KS K G +
Sbjct: 675  KAAESGNTSAINRKTTVPRRSMDIREKMERGEPRFSRILLSPTTEPIKYLEIKSGKQGAQ 734

Query: 541  SES 549
            SE+
Sbjct: 735  SEA 737


>ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  298 bits (762), Expect = 5e-79
 Identities = 140/178 (78%), Positives = 155/178 (87%)
 Frame = +1

Query: 1    SRSEVFTWGKGANGRLGHGDMEDRKAPTIVEGLKDRLVKSISCGSNFTTSICIHKWVSGA 180
            SRSEVFTWG+GANGRLGHGD EDR++PT VE LKDR VKSISCGSNFT SICIHKWVSGA
Sbjct: 557  SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGA 616

Query: 181  DQSVCTGCRQTFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDSCYAKL 360
            DQSVC+GCRQ FGFTRKRHNCYNCGLVHCHACSSKKAL+AALAPTPGKPHRVCD CYAKL
Sbjct: 617  DQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKL 676

Query: 361  KASEAGNASTFSRKSVAPRRSIDSRERFDRGEVRSSRILLSPSAETMKYVDVKSVKPG 534
            KA+EAG+AS F+RK+  PRRSID+  R DRGEVRS+RIL+SP    + Y + K  + G
Sbjct: 677  KAAEAGDASIFNRKNTVPRRSIDATIRSDRGEVRSARILMSPG--PINYFEFKPARLG 732


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