BLASTX nr result

ID: Coptis23_contig00032195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032195
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]                69   4e-10
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    60   4e-09
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]    60   4e-09
ref|XP_003547544.1| PREDICTED: uncharacterized protein LOC100779...    59   5e-09
ref|XP_003527852.1| PREDICTED: amino acid permease 8-like [Glyci...    59   5e-09

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
 Frame = -3

Query: 234  KELKVTKVLGPDF-------GRRSLLY*RSSHIF*F*VLERSHVREIDSLMENKTWKLVD 76
            K  +V K  GPDF        R +L    SSH   F   + +   E++SL+ NKTWKLVD
Sbjct: 763  KRARVEKDFGPDFYVFNVGDDRLTLKEALSSHDSIF--WKEAVNDEMESLISNKTWKLVD 820

Query: 75   LPIGCKTI*IKWVLRRKFKTDGSVD 1
            LP GCKTI  KWVLR+K K DGS+D
Sbjct: 821  LPPGCKTIGCKWVLRKKLKPDGSID 845


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 60.5 bits (145), Expect(2) = 4e-09
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = -3

Query: 120 EIDSLMENKTWKLVDLPIGCKTI*IKWVLRRKFKTDGSVD 1
           EIDS+++N TW+LVDLP GCK +  KW+ +RK K DGS+D
Sbjct: 836 EIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSID 875



 Score = 25.0 bits (53), Expect(2) = 4e-09
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 197 LEGDPSSIEEALTSFDFEFWREVM 126
           LEG+P + +EA+ S +   W+E +
Sbjct: 810 LEGEPQTFKEAVNSTEGLMWKEAI 833


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score = 60.5 bits (145), Expect(2) = 4e-09
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = -3

Query: 120 EIDSLMENKTWKLVDLPIGCKTI*IKWVLRRKFKTDGSVD 1
           EIDS+++N TW+LVDLP GCK +  KW+ +RK K DGS+D
Sbjct: 619 EIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSID 658



 Score = 25.0 bits (53), Expect(2) = 4e-09
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 197 LEGDPSSIEEALTSFDFEFWREVM 126
           LEG+P + +EA+ S +   W+E +
Sbjct: 593 LEGEPQTFKEAVNSTEGLMWKEAI 616


>ref|XP_003547544.1| PREDICTED: uncharacterized protein LOC100779458 [Glycine max]
          Length = 928

 Score = 58.5 bits (140), Expect(2) = 5e-09
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -3

Query: 120 EIDSLMENKTWKLVDLPIGCKTI*IKWVLRRKFKTDGSVD 1
           E+DS+M+N TWKLVDLP GCK +  K + RRK K DG+VD
Sbjct: 82  EMDSIMQNNTWKLVDLPPGCKPLGCKMIFRRKMKVDGTVD 121



 Score = 26.6 bits (57), Expect(2) = 5e-09
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 197 LEGDPSSIEEALTSFDFEFWREVM 126
           +E DP +  EA+ S D  FW+E +
Sbjct: 56  VEEDPKTFSEAMASRDAVFWKEAI 79


>ref|XP_003527852.1| PREDICTED: amino acid permease 8-like [Glycine max]
          Length = 847

 Score = 58.5 bits (140), Expect(2) = 5e-09
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -3

Query: 120 EIDSLMENKTWKLVDLPIGCKTI*IKWVLRRKFKTDGSVD 1
           E+DS+M+N TWKLVDLP GCK +  K + RRK K DG+VD
Sbjct: 82  EMDSIMQNNTWKLVDLPHGCKPLGCKMIFRRKMKVDGTVD 121



 Score = 26.6 bits (57), Expect(2) = 5e-09
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 197 LEGDPSSIEEALTSFDFEFWREVM 126
           +E DP +  EA+ S D  FW+E +
Sbjct: 56  VEEDPKTFSEAMASRDAVFWKEAI 79


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