BLASTX nr result

ID: Coptis23_contig00032185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032185
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]         140   1e-31
ref|XP_002276028.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [...   135   3e-30
ref|XP_002534162.1| acyltransferase, putative [Ricinus communis]...   135   5e-30
gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum]         135   5e-30
emb|CBI33176.3| unnamed protein product [Vitis vinifera]              134   1e-29

>gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]
          Length = 466

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/83 (75%), Positives = 73/83 (87%)
 Frame = -3

Query: 327 SSLWYVLGYMQAKQRLKKGDKVLMISFGSGFKCNSCLLEVMRDLKDENVWKDCIASYPPN 148
           SSLWYVL YM+AK+RLKKGDKVLMISFG+GFKCNSCL E++RDL+D NVWKD I +YPP 
Sbjct: 381 SSLWYVLAYMEAKKRLKKGDKVLMISFGAGFKCNSCLWEIVRDLEDGNVWKDEIQNYPPK 440

Query: 147 TLVNPYMEKYKWVFDENPSPAKV 79
           TLVNPYMEKY W+ DE+PS  K+
Sbjct: 441 TLVNPYMEKYGWIKDEDPSTFKI 463


>ref|XP_002276028.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Vitis vinifera]
          Length = 460

 Score =  135 bits (340), Expect = 3e-30
 Identities = 55/79 (69%), Positives = 72/79 (91%)
 Frame = -3

Query: 327 SSLWYVLGYMQAKQRLKKGDKVLMISFGSGFKCNSCLLEVMRDLKDENVWKDCIASYPPN 148
           SS+WYVLGYM+AK+RLKKGD+VLMISFG+GFKCNSC+ +V+RDL+D NVW+DC++ YPP 
Sbjct: 375 SSVWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSCMWDVVRDLEDGNVWEDCVSLYPPK 434

Query: 147 TLVNPYMEKYKWVFDENPS 91
           TL NP+MEKY W++ E+P+
Sbjct: 435 TLANPFMEKYGWIYQEDPT 453


>ref|XP_002534162.1| acyltransferase, putative [Ricinus communis]
           gi|223525766|gb|EEF28222.1| acyltransferase, putative
           [Ricinus communis]
          Length = 475

 Score =  135 bits (339), Expect = 5e-30
 Identities = 57/79 (72%), Positives = 71/79 (89%)
 Frame = -3

Query: 327 SSLWYVLGYMQAKQRLKKGDKVLMISFGSGFKCNSCLLEVMRDLKDENVWKDCIASYPPN 148
           SSLWYVL YM+AK+RLKKGD++LMISFG+GFKCNSC+ EV+RDL++ NVWKDCI SYPP 
Sbjct: 387 SSLWYVLAYMEAKKRLKKGDRILMISFGAGFKCNSCVWEVVRDLENSNVWKDCIDSYPPK 446

Query: 147 TLVNPYMEKYKWVFDENPS 91
           TL NP+MEKY W+++E+ S
Sbjct: 447 TLANPFMEKYGWIYNEDES 465


>gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum]
          Length = 467

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/79 (78%), Positives = 69/79 (87%)
 Frame = -3

Query: 327 SSLWYVLGYMQAKQRLKKGDKVLMISFGSGFKCNSCLLEVMRDLKDENVWKDCIASYPPN 148
           SSLWYVL YM+AK+RLKKGDKVLMISFG+GFKCNSCL EV+RDL D NVWKD I  YPP 
Sbjct: 383 SSLWYVLAYMEAKKRLKKGDKVLMISFGAGFKCNSCLWEVVRDLGDGNVWKDEIYMYPPK 442

Query: 147 TLVNPYMEKYKWVFDENPS 91
           TLVNPYMEK+ W+ DE+PS
Sbjct: 443 TLVNPYMEKFGWIQDEDPS 461


>emb|CBI33176.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  134 bits (336), Expect = 1e-29
 Identities = 54/79 (68%), Positives = 71/79 (89%)
 Frame = -3

Query: 327 SSLWYVLGYMQAKQRLKKGDKVLMISFGSGFKCNSCLLEVMRDLKDENVWKDCIASYPPN 148
           S +WYVLGYM+AK+RLKKGD+VLMISFG+GFKCNSC+ +V+RDL+D NVW+DC++ YPP 
Sbjct: 221 SDVWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSCMWDVVRDLEDGNVWEDCVSLYPPK 280

Query: 147 TLVNPYMEKYKWVFDENPS 91
           TL NP+MEKY W++ E+P+
Sbjct: 281 TLANPFMEKYGWIYQEDPT 299


Top