BLASTX nr result

ID: Coptis23_contig00032156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032156
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553541.1| PREDICTED: probable beta-1,4-xylosyltransfer...   140   1e-31
ref|XP_003537266.1| PREDICTED: probable beta-1,4-xylosyltransfer...   139   3e-31
ref|XP_002525174.1| beta-1,3-glucuronyltransferase, putative [Ri...   137   9e-31
gb|AAX33319.1| secondary cell wall-related glycosyltransferase f...   136   2e-30
emb|CBI32696.3| unnamed protein product [Vitis vinifera]              136   2e-30

>ref|XP_003553541.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9-like [Glycine
           max]
          Length = 344

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/96 (69%), Positives = 77/96 (80%)
 Frame = -2

Query: 296 RKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERWGRASSV 117
           RK+V +EGPVCDS QVIGWHL RN+   +  +   +H SSFAFNSSILWDPERWGR SSV
Sbjct: 238 RKKVKIEGPVCDSSQVIGWHL-RNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSV 296

Query: 116 QYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLW 9
           Q TSQNSIK V++VV EDE K+K +P EDCSKILLW
Sbjct: 297 QDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLW 332


>ref|XP_003537266.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9-like [Glycine
           max]
          Length = 347

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = -2

Query: 293 KRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERWGRASSVQ 114
           K+V++EGPVCDS QVIGWHL RN+   +  +   +H SSFAFNSSILWDPERWGR SS+Q
Sbjct: 230 KKVIIEGPVCDSSQVIGWHL-RNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSLQ 288

Query: 113 YTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLW 9
            TSQNSIK V+EVV EDE K+K +P EDCS+ILLW
Sbjct: 289 DTSQNSIKFVKEVVLEDEAKLKGIPPEDCSRILLW 323


>ref|XP_002525174.1| beta-1,3-glucuronyltransferase, putative [Ricinus communis]
           gi|223535471|gb|EEF37140.1|
           beta-1,3-glucuronyltransferase, putative [Ricinus
           communis]
          Length = 369

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/98 (62%), Positives = 78/98 (79%)
 Frame = -2

Query: 296 RKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERWGRASSV 117
           + +V++EGP+CDS QVIGWHL +    + T+    +H SSFAFNSSILWDPERWGR SSV
Sbjct: 243 KNKVIIEGPICDSSQVIGWHLKKMNNNNQTDARPPIHISSFAFNSSILWDPERWGRPSSV 302

Query: 116 QYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWEL 3
            +TSQNSIK V++V  EDETK+K +P E+CSKI+LW+L
Sbjct: 303 PHTSQNSIKFVKQVALEDETKLKGIPPEECSKIMLWQL 340


>gb|AAX33319.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 356

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/97 (65%), Positives = 76/97 (78%)
 Frame = -2

Query: 293 KRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERWGRASSVQ 114
           K+V++EGPVCDS QVIGWHL +    + T+    +H SSF FNSSILWDPERWGR SSVQ
Sbjct: 243 KKVIIEGPVCDSSQVIGWHLRK--MNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQ 300

Query: 113 YTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWEL 3
            TSQNSIK V++V  EDETK+K +P EDCSKI+LW L
Sbjct: 301 QTSQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRL 337


>emb|CBI32696.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/98 (67%), Positives = 77/98 (78%)
 Frame = -2

Query: 296 RKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERWGRASSV 117
           R +V++EGPVCDS QVIGWHL +   E+ T   S LH S F+FNSSILWDPERWGR SSV
Sbjct: 175 RNKVIMEGPVCDSSQVIGWHLKKMNNETETR--SPLHISGFSFNSSILWDPERWGRPSSV 232

Query: 116 QYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWEL 3
           Q  SQNSIK V+EV  EDE+K+K +PQEDCS+ILLW L
Sbjct: 233 QDNSQNSIKFVKEVALEDESKLKGIPQEDCSRILLWNL 270


Top