BLASTX nr result

ID: Coptis23_contig00032140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032140
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39093.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002309274.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_003554494.1| PREDICTED: probable E3 ubiquitin-protein lig...   173   1e-41
ref|XP_002268495.1| PREDICTED: probable E3 ubiquitin-protein lig...   172   3e-41
ref|XP_002322754.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>emb|CBI39093.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/119 (69%), Positives = 100/119 (84%)
 Frame = -2

Query: 358 DSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYSLKCAICLDTVFNSYALGCGHLFCKACA 179
           +S   S QFSCDL++ +PVMTL + DS+KLE +L C+ICLDT+FN +AL CGHLFCK+CA
Sbjct: 193 ESCKISCQFSCDLSTTEPVMTLRLPDSMKLECNLTCSICLDTLFNPHALSCGHLFCKSCA 252

Query: 178 CSAASVMVFDGLKEAEPDTKCPVCREVGVYANAVHMVELDLLLKNRCREYWKERAHAER 2
           CSAASVM+F GLK A P++KCP+CRE GVY+NAV M+ELDLLLK RCREYWKER  AER
Sbjct: 253 CSAASVMIFQGLKAASPESKCPICREAGVYSNAVEMLELDLLLKRRCREYWKERLIAER 311


>ref|XP_002309274.1| predicted protein [Populus trichocarpa] gi|222855250|gb|EEE92797.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/119 (68%), Positives = 94/119 (78%)
 Frame = -2

Query: 361 GDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYSLKCAICLDTVFNSYALGCGHLFCKAC 182
           G+   F +QFSCDL   +PVMTL + +S KLEYSL CAICL+TVFN YAL CGHLFCK C
Sbjct: 199 GEFSEFCSQFSCDLNGTEPVMTLTLPNSTKLEYSLTCAICLETVFNPYALSCGHLFCKLC 258

Query: 181 ACSAASVMVFDGLKEAEPDTKCPVCREVGVYANAVHMVELDLLLKNRCREYWKERAHAE 5
           ACSAA V++F+GLK A  + KCP+CRE GVY NAVHM+ELDLLLK RC EYWKER  AE
Sbjct: 259 ACSAAFVLMFEGLKTASSNAKCPICREAGVYTNAVHMLELDLLLKRRCNEYWKERMAAE 317


>ref|XP_003554494.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Glycine
           max]
          Length = 324

 Score =  173 bits (438), Expect = 1e-41
 Identities = 77/117 (65%), Positives = 96/117 (82%)
 Frame = -2

Query: 352 GVFSNQFSCDLTSDQPVMTLLISDSLKLEYSLKCAICLDTVFNSYALGCGHLFCKACACS 173
           GV+  +FSC+L   + VMTL++ DS+ LE+ L CAICLD VFN YAL CGH+FCK+CACS
Sbjct: 187 GVYG-RFSCELNITKAVMTLVLPDSINLEHDLTCAICLDFVFNPYALSCGHIFCKSCACS 245

Query: 172 AASVMVFDGLKEAEPDTKCPVCREVGVYANAVHMVELDLLLKNRCREYWKERAHAER 2
           AASVM+F GLK A P++KCP+CREVGVY+ AVHM+ELDLL+K RC++YWKER   ER
Sbjct: 246 AASVMIFQGLKAASPESKCPICREVGVYSKAVHMLELDLLVKRRCKDYWKERLAGER 302


>ref|XP_002268495.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1-like
           [Vitis vinifera]
          Length = 330

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/119 (68%), Positives = 98/119 (82%)
 Frame = -2

Query: 358 DSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYSLKCAICLDTVFNSYALGCGHLFCKACA 179
           +S   S QFSCDL++ +PVMTL + DS+KLE +L C+ICLDT+FN +AL CGHLFCK+CA
Sbjct: 193 ESCKISCQFSCDLSTTEPVMTLRLPDSMKLECNLTCSICLDTLFNPHALSCGHLFCKSCA 252

Query: 178 CSAASVMVFDGLKEAEPDTKCPVCREVGVYANAVHMVELDLLLKNRCREYWKERAHAER 2
           CSAASVM+F GLK A P++KCP+CRE GVY+NAV M+ELDLLLK   REYWKER  AER
Sbjct: 253 CSAASVMIFQGLKAASPESKCPICREAGVYSNAVEMLELDLLLKR--REYWKERLIAER 309


>ref|XP_002322754.1| predicted protein [Populus trichocarpa] gi|222867384|gb|EEF04515.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  172 bits (436), Expect = 3e-41
 Identities = 77/120 (64%), Positives = 95/120 (79%)
 Frame = -2

Query: 361 GDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYSLKCAICLDTVFNSYALGCGHLFCKAC 182
           G+   F ++FSCDL++ +PVMTL++ +  KLEY L CAICL+ VFN YAL CGHLFCK C
Sbjct: 198 GEFSEFCSRFSCDLSATEPVMTLMLPNYTKLEYGLTCAICLEMVFNPYALSCGHLFCKLC 257

Query: 181 ACSAASVMVFDGLKEAEPDTKCPVCREVGVYANAVHMVELDLLLKNRCREYWKERAHAER 2
           AC AASV++ +GLK A  + KCPVCRE GVY NAVHM+ELDLL+K RC+E+WKER  AER
Sbjct: 258 ACLAASVLMVEGLKSASSNAKCPVCREAGVYTNAVHMLELDLLVKRRCKEHWKERMVAER 317


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