BLASTX nr result

ID: Coptis23_contig00032139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032139
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 4...   128   6e-28
emb|CBI21565.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002304332.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 2...   122   2e-26
ref|XP_002273479.1| PREDICTED: probable protein phosphatase 2C 2...   120   2e-25

>ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 47-like [Vitis vinifera]
          Length = 388

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/110 (59%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = +1

Query: 178 AMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDG 357
           AMED    + LD+S  Q+ IGKPPR    MRHC+SS RL   ++ +S+I    LKSPS  
Sbjct: 27  AMEDMN-DETLDHS-NQLNIGKPPRSLSVMRHCISSARLTGAADWESDIGIISLKSPSSE 84

Query: 358 KH-FLPIFRSGSWSEIGPKSYMEDEHICVDNLHKHLGAFADFPSPGAFYG 504
           K  +LP+ RSGSWSEIGPK YMEDE+IC+DN HKH GA  + PSPGAFYG
Sbjct: 85  KSGYLPVLRSGSWSEIGPKQYMEDEYICIDNFHKHFGAAPNIPSPGAFYG 134


>emb|CBI21565.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/109 (58%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
 Frame = +1

Query: 181 MEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDGK 360
           MED    + LD+S  Q+ IGKPPR    MRHC+SS RL   ++ +S+I    LKSPS  K
Sbjct: 1   MEDMN-DETLDHS-NQLNIGKPPRSLSVMRHCISSARLTGAADWESDIGIISLKSPSSEK 58

Query: 361 H-FLPIFRSGSWSEIGPKSYMEDEHICVDNLHKHLGAFADFPSPGAFYG 504
             +LP+ RSGSWSEIGPK YMEDE+IC+DN HKH GA  + PSPGAFYG
Sbjct: 59  SGYLPVLRSGSWSEIGPKQYMEDEYICIDNFHKHFGAAPNIPSPGAFYG 107


>ref|XP_002304332.1| predicted protein [Populus trichocarpa] gi|222841764|gb|EEE79311.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  123 bits (309), Expect = 1e-26
 Identities = 69/109 (63%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = +1

Query: 181 MEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPS-DG 357
           MEDE   + LDNS  Q+T GKPPR+   +RHC SS    D    +SEI   GL SPS + 
Sbjct: 1   MEDEKDEN-LDNS-NQLTTGKPPRNVKMVRHCSSSAFFTD---FESEIAILGLVSPSSEN 55

Query: 358 KHFLPIFRSGSWSEIGPKSYMEDEHICVDNLHKHLGAFADFPSPGAFYG 504
             FLPIFRSGSWSE GPK YMEDEHICVDNLHKHL   A+ PSPGAFYG
Sbjct: 56  SVFLPIFRSGSWSEKGPKQYMEDEHICVDNLHKHLVTSAELPSPGAFYG 104


>ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 27 isoform 2 [Vitis
           vinifera]
          Length = 385

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
 Frame = +1

Query: 142 VLKIGLVKDERYAMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSE 321
           +L +G  K     MEDE  ++   ++ KQ+T GKPPR    MRHC+SS RL+  ++ +  
Sbjct: 13  LLDVGYSKVNVSVMEDENSNN--SDNLKQLTNGKPPRHLSVMRHCISSARLLAATDFELG 70

Query: 322 IEFRGLKSPSDGKH-FLPIFRSGSWSEIGPKSYMEDEHICVDNLHKHLGAFADFPSPGAF 498
                +KSP DGK  FLP+FRSGS +E GPK YMEDEHIC+DNL +HLGA ADFP PGAF
Sbjct: 71  TGMI-VKSPPDGKSGFLPVFRSGSCAERGPKQYMEDEHICIDNLIEHLGATADFPCPGAF 129

Query: 499 YG 504
           YG
Sbjct: 130 YG 131


>ref|XP_002273479.1| PREDICTED: probable protein phosphatase 2C 27 isoform 1 [Vitis
           vinifera] gi|297745575|emb|CBI40740.3| unnamed protein
           product [Vitis vinifera]
          Length = 360

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/109 (57%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
 Frame = +1

Query: 181 MEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDGK 360
           MEDE  ++   ++ KQ+T GKPPR    MRHC+SS RL+  ++ +       +KSP DGK
Sbjct: 1   MEDENSNN--SDNLKQLTNGKPPRHLSVMRHCISSARLLAATDFELGTGMI-VKSPPDGK 57

Query: 361 H-FLPIFRSGSWSEIGPKSYMEDEHICVDNLHKHLGAFADFPSPGAFYG 504
             FLP+FRSGS +E GPK YMEDEHIC+DNL +HLGA ADFP PGAFYG
Sbjct: 58  SGFLPVFRSGSCAERGPKQYMEDEHICIDNLIEHLGATADFPCPGAFYG 106


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