BLASTX nr result

ID: Coptis23_contig00032121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032121
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36765.3| unnamed protein product [Vitis vinifera]              283   3e-74
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   283   3e-74
gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   281   1e-73
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   281   1e-73
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   281   1e-73

>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  283 bits (725), Expect = 3e-74
 Identities = 151/293 (51%), Positives = 194/293 (66%), Gaps = 10/293 (3%)
 Frame = -3

Query: 849 NSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETL 670
           N  P+LPPT     F+P   VP+ +IDTSS +EN      +L+ AD VV+TYACD+  TL
Sbjct: 81  NVAPVLPPTRLPDDFYPDR-VPITIIDTSSSLENRSALADELRRADAVVLTYACDQPATL 139

Query: 669 ERLTTLWIPALRHMKLNVPVVVVGCKTDAGSETKEKRKE-VLVEITKKFPEIESCIECSA 493
           +RL+T W+P LR +++ VPV+VVGCK D   E ++   E V+  I ++F EIE+CIECSA
Sbjct: 140 DRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQVMSPIMQQFREIETCIECSA 199

Query: 492 ANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEKALKWVFKLCDRDLDGALSDEEL 313
           +   ++ EV    Q+AVL P G L+  ETQ LKP C +ALK +F LCD D DGALSD EL
Sbjct: 200 STHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDRDGALSDAEL 259

Query: 312 NDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLTLMGFLSLHEHLGSHG----TWT 160
           NDF  KC      PS+I  +K  ++E+L  G ND GLTL GFL LH      G    TWT
Sbjct: 260 NDFQVKCFNAPLQPSEISGVKRVVQEKLHEGVNDRGLTLTGFLFLHALFIEKGRLETTWT 319

Query: 159 ILRKFGYGKGFKLRDDILPVSFDRSPDQSVELTQNAIEFLKKIFSQFDHDQDG 1
           +LRKFGY    KLR+D++P+SF R+PDQ++ELT  A+EFLK IFS FD D DG
Sbjct: 320 VLRKFGYNNDIKLREDLIPLSFKRAPDQNMELTTEALEFLKGIFSLFDIDGDG 372


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  283 bits (725), Expect = 3e-74
 Identities = 151/293 (51%), Positives = 194/293 (66%), Gaps = 10/293 (3%)
 Frame = -3

Query: 849 NSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETL 670
           N  P+LPPT     F+P   VP+ +IDTSS +EN      +L+ AD VV+TYACD+  TL
Sbjct: 44  NVAPVLPPTRLPDDFYPDR-VPITIIDTSSSLENRSALADELRRADAVVLTYACDQPATL 102

Query: 669 ERLTTLWIPALRHMKLNVPVVVVGCKTDAGSETKEKRKE-VLVEITKKFPEIESCIECSA 493
           +RL+T W+P LR +++ VPV+VVGCK D   E ++   E V+  I ++F EIE+CIECSA
Sbjct: 103 DRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQVMSPIMQQFREIETCIECSA 162

Query: 492 ANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEKALKWVFKLCDRDLDGALSDEEL 313
           +   ++ EV    Q+AVL P G L+  ETQ LKP C +ALK +F LCD D DGALSD EL
Sbjct: 163 STHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDRDGALSDAEL 222

Query: 312 NDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLTLMGFLSLHEHLGSHG----TWT 160
           NDF  KC      PS+I  +K  ++E+L  G ND GLTL GFL LH      G    TWT
Sbjct: 223 NDFQVKCFNAPLQPSEISGVKRVVQEKLHEGVNDRGLTLTGFLFLHALFIEKGRLETTWT 282

Query: 159 ILRKFGYGKGFKLRDDILPVSFDRSPDQSVELTQNAIEFLKKIFSQFDHDQDG 1
           +LRKFGY    KLR+D++P+SF R+PDQ++ELT  A+EFLK IFS FD D DG
Sbjct: 283 VLRKFGYNNDIKLREDLIPLSFKRAPDQNMELTTEALEFLKGIFSLFDIDGDG 335


>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  281 bits (720), Expect = 1e-73
 Identities = 150/293 (51%), Positives = 192/293 (65%), Gaps = 10/293 (3%)
 Frame = -3

Query: 849 NSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETL 670
           N PP+LPPT     F+P   VP  +IDTSSR E+  K  ++LK AD VV+TYACD+  TL
Sbjct: 44  NVPPVLPPTRLPEDFYPDR-VPTTIIDTSSRTEDSAKVAEELKRADAVVLTYACDQPNTL 102

Query: 669 ERLTTLWIPALRHMKLNVPVVVVGCKTDAGSETKE-KRKEVLVEITKKFPEIESCIECSA 493
           +RL+T W+P LR +++ VPV+VVGCK D   E ++   ++V+  I ++F EIE+CIECSA
Sbjct: 103 DRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDENQQVSLEQVMSPIMQQFREIETCIECSA 162

Query: 492 ANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEKALKWVFKLCDRDLDGALSDEEL 313
               ++ EV    Q+AVL P G L+  ETQ LKP C +ALK +F LCD D DGALSD EL
Sbjct: 163 FKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDKDGALSDAEL 222

Query: 312 NDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLTLMGFLSLHEHLGSHG----TWT 160
           NDF  KC      PS+I  +K  ++E+LP G ND GLTL GFL LH      G    TWT
Sbjct: 223 NDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDRGLTLTGFLFLHALFIEKGRLETTWT 282

Query: 159 ILRKFGYGKGFKLRDDILPVSFDRSPDQSVELTQNAIEFLKKIFSQFDHDQDG 1
           +LRKFGY    KL D+++P    R+PDQSVELT  A+EFL+ IF  +D D DG
Sbjct: 283 VLRKFGYDNDIKLSDELIPTLGKRAPDQSVELTNEALEFLRGIFELYDGDGDG 335


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  281 bits (719), Expect = 1e-73
 Identities = 150/293 (51%), Positives = 192/293 (65%), Gaps = 10/293 (3%)
 Frame = -3

Query: 849 NSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETL 670
           N PP+LPPT     F+P   VP  +IDTSSR E+  K  ++LK AD VV+TYACD+  TL
Sbjct: 44  NVPPVLPPTRLPEDFYPDR-VPTTIIDTSSRTEDSAKVAEELKRADAVVLTYACDQPNTL 102

Query: 669 ERLTTLWIPALRHMKLNVPVVVVGCKTDAGSETKE-KRKEVLVEITKKFPEIESCIECSA 493
           +RL+T W+P LR +++ VPV+VVGCK D   E ++   ++V+  I ++F EIE+CIECSA
Sbjct: 103 DRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQQFREIETCIECSA 162

Query: 492 ANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEKALKWVFKLCDRDLDGALSDEEL 313
               ++ EV    Q+AVL P G L+  ETQ LKP C +ALK +F LCD D DGALSD EL
Sbjct: 163 FKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDKDGALSDAEL 222

Query: 312 NDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLTLMGFLSLHEHLGSHG----TWT 160
           NDF  KC      PS+I  +K  ++E+LP G ND GLTL GFL LH      G    TWT
Sbjct: 223 NDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDHGLTLTGFLFLHALFIEKGRLETTWT 282

Query: 159 ILRKFGYGKGFKLRDDILPVSFDRSPDQSVELTQNAIEFLKKIFSQFDHDQDG 1
           +LRKFGY    KL D+++P    R+PDQSVELT  A+EFL+ IF  +D D DG
Sbjct: 283 VLRKFGYDNDIKLSDELIPTLGKRAPDQSVELTNEALEFLRGIFELYDGDGDG 335


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  281 bits (719), Expect = 1e-73
 Identities = 150/293 (51%), Positives = 192/293 (65%), Gaps = 10/293 (3%)
 Frame = -3

Query: 849 NSPPLLPPTVFHSHFFPHNPVPLIVIDTSSRVENERKRDKKLKAADGVVVTYACDRIETL 670
           N PP+LPPT     F+P   VP  +IDTSSR E+  K  ++LK AD VV+TYACD+  TL
Sbjct: 44  NVPPVLPPTRLPEDFYPDR-VPTTIIDTSSRTEDSAKVAEELKRADAVVLTYACDQPNTL 102

Query: 669 ERLTTLWIPALRHMKLNVPVVVVGCKTDAGSETKE-KRKEVLVEITKKFPEIESCIECSA 493
           +RL+T W+P LR +++ VPV+VVGCK D   E ++   ++V+  I ++F EIE+CIECSA
Sbjct: 103 DRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQQFREIETCIECSA 162

Query: 492 ANPFEVLEVISCIQRAVLFPQGLLYHPETQKLKPECEKALKWVFKLCDRDLDGALSDEEL 313
               ++ EV    Q+AVL P G L+  ETQ LKP C +ALK +F LCD D DGALSD EL
Sbjct: 163 FKHIQIPEVFYYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDKDGALSDAEL 222

Query: 312 NDFLGKCL-----PSQIEVIKADIKERLPNGFNDCGLTLMGFLSLHEHLGSHG----TWT 160
           NDF  KC      PS+I  +K  ++E+LP G ND GLTL GFL LH      G    TWT
Sbjct: 223 NDFQVKCFNAPLQPSEIVGVKRVVQEKLPEGVNDHGLTLTGFLFLHALFIEKGRLETTWT 282

Query: 159 ILRKFGYGKGFKLRDDILPVSFDRSPDQSVELTQNAIEFLKKIFSQFDHDQDG 1
           +LRKFGY    KL D+++P    R+PDQSVELT  A+EFL+ IF  +D D DG
Sbjct: 283 VLRKFGYDNDIKLSDELIPTLGKRAPDQSVELTNEALEFLRGIFELYDGDGDG 335


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