BLASTX nr result

ID: Coptis23_contig00032101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032101
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19097.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002284301.2| PREDICTED: phosphopantothenate--cysteine lig...   162   3e-38
emb|CAN76608.1| hypothetical protein VITISV_039485 [Vitis vinifera]   160   1e-37
ref|XP_002301023.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_003609113.1| Phosphopantothenate-cysteine ligase [Medicag...   154   7e-36

>emb|CBI19097.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/118 (69%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
 Frame = +3

Query: 36  TFQMDSSNGPGVPPETLND--IISFFSSAPPLRDDLNISRKLHEFIERNFSSSGNGYPRR 209
           T  MDS+N    P + L D  I SFF SAPPL+D ++I RK+ EFIER+   SGN   RR
Sbjct: 32  TLSMDSTNEIEAPQDMLLDMEITSFFDSAPPLKDGIDIDRKITEFIERHSPLSGNLGERR 91

Query: 210 IVCVTSGGTTVPLEQRCVRYIDNFSPGHRGATSTEYFVKAGYAVIFLHRRGSCQPYCR 383
           IVCVTSGGTTVPLE+RCVR+IDNFS GHRGA STEYF+KAGY VIFL+RRGSCQPYCR
Sbjct: 92  IVCVTSGGTTVPLERRCVRFIDNFSSGHRGAASTEYFLKAGYGVIFLYRRGSCQPYCR 149


>ref|XP_002284301.2| PREDICTED: phosphopantothenate--cysteine ligase 1-like [Vitis
           vinifera]
          Length = 329

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
 Frame = +3

Query: 45  MDSSNGPGVPPETLND--IISFFSSAPPLRDDLNISRKLHEFIERNFSSSGNGYPRRIVC 218
           MDS+N    P + L D  I SFF SAPPL+D ++I RK+ EFIER+   SGN   RRIVC
Sbjct: 1   MDSTNEIEAPQDMLLDMEITSFFDSAPPLKDGIDIDRKITEFIERHSPLSGNLGERRIVC 60

Query: 219 VTSGGTTVPLEQRCVRYIDNFSPGHRGATSTEYFVKAGYAVIFLHRRGSCQPYCR 383
           VTSGGTTVPLE+RCVR+IDNFS GHRGA STEYF+KAGY VIFL+RRGSCQPYCR
Sbjct: 61  VTSGGTTVPLERRCVRFIDNFSSGHRGAASTEYFLKAGYGVIFLYRRGSCQPYCR 115


>emb|CAN76608.1| hypothetical protein VITISV_039485 [Vitis vinifera]
          Length = 329

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/115 (69%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
 Frame = +3

Query: 45  MDSSNGPGVPPETLND--IISFFSSAPPLRDDLNISRKLHEFIERNFSSSGNGYPRRIVC 218
           MDS+N    P + L D  I SFF SAPPL+D ++  RK+ EFIER+   SGN   RRIVC
Sbjct: 1   MDSTNEIEAPQDMLLDMEITSFFDSAPPLKDGIDXDRKITEFIERHSPLSGNLGERRIVC 60

Query: 219 VTSGGTTVPLEQRCVRYIDNFSPGHRGATSTEYFVKAGYAVIFLHRRGSCQPYCR 383
           VTSGGTTVPLE+RCVR+IDNFS GHRGA STEYF+KAGY VIFL+RRGSCQPYCR
Sbjct: 61  VTSGGTTVPLERRCVRFIDNFSSGHRGAASTEYFLKAGYGVIFLYRRGSCQPYCR 115


>ref|XP_002301023.1| predicted protein [Populus trichocarpa] gi|222842749|gb|EEE80296.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/116 (68%), Positives = 90/116 (77%), Gaps = 3/116 (2%)
 Frame = +3

Query: 45  MDSSNGPGVPPETLNDIISFFSSAPPLRDDLNISRKLHEFIERNFS---SSGNGYPRRIV 215
           MDS NG         +I SFF SAPPL+D   I +KL EFIE N +   ++G G PRR+V
Sbjct: 1   MDSRNGSVSEALLDAEIESFFDSAPPLKDRAGIIKKLKEFIEYNSTPPVNAGKGSPRRVV 60

Query: 216 CVTSGGTTVPLEQRCVRYIDNFSPGHRGATSTEYFVKAGYAVIFLHRRGSCQPYCR 383
           CVTSGGTTVPLEQRCVRYIDNFS GHRGATSTEYF+KAGYAVIFL+RRG+ QPYC+
Sbjct: 61  CVTSGGTTVPLEQRCVRYIDNFSSGHRGATSTEYFIKAGYAVIFLYRRGTFQPYCQ 116


>ref|XP_003609113.1| Phosphopantothenate-cysteine ligase [Medicago truncatula]
           gi|355510168|gb|AES91310.1| Phosphopantothenate-cysteine
           ligase [Medicago truncatula]
          Length = 321

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/103 (72%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
 Frame = +3

Query: 78  ETLN-DIISFFSSAPPLRDDLNISRKLHEFIERNFSSSGNGYPRRIVCVTSGGTTVPLEQ 254
           ETL   + +FF SAPPL +   I++KL++FI+RN SSS NG  RRIVCVTSGGTT PLEQ
Sbjct: 8   ETLEAQVKAFFDSAPPLHNSHEITQKLNQFIQRNSSSSENGEARRIVCVTSGGTTAPLEQ 67

Query: 255 RCVRYIDNFSPGHRGATSTEYFVKAGYAVIFLHRRGSCQPYCR 383
           RCVRY+DNFS GHRGATSTEYF+KAGYAVIFL+RRGS QP+CR
Sbjct: 68  RCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLYRRGSFQPFCR 110


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