BLASTX nr result

ID: Coptis23_contig00032099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032099
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL14364.1| CUP-SHAPED COTYLEDON3 [Aquilegia coerulea]             125   4e-27
ref|XP_002273222.2| PREDICTED: protein CUP-SHAPED COTYLEDON 3-li...    63   3e-08
ref|XP_002300627.1| NAC domain protein, IPR003441 [Populus trich...    63   3e-08
ref|XP_002510719.1| transcription factor, putative [Ricinus comm...    57   1e-06
emb|CBI40758.3| unnamed protein product [Vitis vinifera]               56   3e-06

>gb|ACL14364.1| CUP-SHAPED COTYLEDON3 [Aquilegia coerulea]
          Length = 363

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/105 (59%), Positives = 74/105 (70%)
 Frame = -3

Query: 317 QTPTFPLQNSSLIKEETDLKTLLNPSGFPAHTLPTNYQSSFSPTTVNSTDLSSSIMFKTL 138
           QTP   LQNS  +K+E+DLK +LNP     H   TN+QS++SPT++  T   SS MFK  
Sbjct: 211 QTPLHSLQNSFALKQESDLKAILNPYAIQLHDFHTNFQSTYSPTSIKDTSPLSSFMFKNS 270

Query: 137 LSNQDTILKESTVQKQFKTDTAFFHFQPGDANFYGLDKVQQNLWQ 3
           LSNQD+ILKE TV KQFK +T F HFQP DA F  +DKVQQNLWQ
Sbjct: 271 LSNQDSILKEPTVPKQFKRETNFPHFQPFDATFNCMDKVQQNLWQ 315


>ref|XP_002273222.2| PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Vitis vinifera]
          Length = 405

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 18/110 (16%)
 Frame = -3

Query: 278 KEETDLKTLLNPS------GFPAHTLPTNYQSSFSPTT-------VNST----DLSSSIM 150
           +E  +LK L+NP        FP ++   +   S +PTT       +NST    + S+SI+
Sbjct: 234 QESNELKALINPVLSQSPLAFPINSGFQSCSFSTTPTTNIPNTNNINSTTGNNNPSTSIL 293

Query: 149 FKTLLSNQDTILKE-STVQKQFKTDTAFFHFQPGDANFYGLDKVQQNLWQ 3
           FK+LLS+Q+  LKE +T+ KQ KT+  F HFQ  DAN + +D++  NL Q
Sbjct: 294 FKSLLSHQECSLKEQTTIPKQCKTEANFSHFQLPDANMHWVDRMNSNLHQ 343


>ref|XP_002300627.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222842353|gb|EEE79900.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 403

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 20/112 (17%)
 Frame = -3

Query: 296 QNSSLIKE--ETDLKTLLNPSGFPAHTLPTN-YQSSFSPTTV---------------NST 171
           QN+ LI E  E DLK+LLNP    ++ +  N +Q  FSPT++               N+ 
Sbjct: 224 QNAFLIHEHQENDLKSLLNPLVSQSNAMSINGFQPCFSPTSISINSTTTSTNKNTDTNTN 283

Query: 170 DLSSSIMFKTLLSNQDTILKE--STVQKQFKTDTAFFHFQPGDANFYGLDKV 21
           + S S++FK++LS QD  LKE  ST+ KQ  T+  F HFQ  DA+   +DK+
Sbjct: 284 NQSPSMLFKSILSYQDCALKEQSSTLYKQCNTEANFSHFQLHDAHLGCVDKI 335


>ref|XP_002510719.1| transcription factor, putative [Ricinus communis]
           gi|223551420|gb|EEF52906.1| transcription factor,
           putative [Ricinus communis]
          Length = 402

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 22/124 (17%)
 Frame = -3

Query: 317 QTPTFPLQNSSLIK-EETDLKTLL-NPSGFPAH-TLPTN---YQSSFSPTTV-------- 180
           Q  T  LQN  LI+ +E DLK+LL +P     H T+  N   +Q SFSPTT         
Sbjct: 213 QAGTDGLQNPFLIQHQENDLKSLLLSPLLSQCHNTVSINGIQFQPSFSPTTPIAISTNTE 272

Query: 179 ------NSTDLSSSIMFKTLLSNQDTILKE-STVQKQFKTDTAFFHFQPGDANF-YGLDK 24
                  +T+ + S++FK+LLS+QD  LKE S V KQ KT+  F HFQ  +AN  + +DK
Sbjct: 273 TNKNIDTNTNNNPSMLFKSLLSHQDCTLKEQSPVLKQCKTEANFSHFQLPEANLNWMMDK 332

Query: 23  VQQN 12
           +  +
Sbjct: 333 IHHH 336


>emb|CBI40758.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -3

Query: 188 TTVNSTDLSSSIMFKTLLSNQDTILKE-STVQKQFKTDTAFFHFQPGDANFYGLDKVQQN 12
           +T  + + S+SI+FK+LLS+Q+  LKE +T+ KQ KT+  F HFQ  DAN + +D++  N
Sbjct: 198 STTGNNNPSTSILFKSLLSHQECSLKEQTTIPKQCKTEANFSHFQLPDANMHWVDRMNSN 257

Query: 11  LWQ 3
           L Q
Sbjct: 258 LHQ 260


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