BLASTX nr result
ID: Coptis23_contig00032076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00032076
(810 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAY93125.1| hypothetical protein OsI_14931 [Oryza sativa Indi... 58 5e-11
gb|EEC68131.1| hypothetical protein OsI_36044 [Oryza sativa Indi... 60 3e-10
ref|NP_001068202.1| Os11g0593700 [Oryza sativa Japonica Group] g... 55 4e-10
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm... 58 1e-09
ref|XP_002451038.1| hypothetical protein SORBIDRAFT_05g023040 [S... 50 2e-09
>gb|EAY93125.1| hypothetical protein OsI_14931 [Oryza sativa Indica Group]
Length = 423
Score = 58.2 bits (139), Expect(2) = 5e-11
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Frame = +3
Query: 372 NSKVYKMEAPEIADRRIYG-SCQGGWLITVHENGEIQMMHPFSKSVIDLPPITELPGVNG 548
N+ +K+ P RR Y GW++T E +Q+++P S IDLPP+TEL V
Sbjct: 76 NNATFKVRLPGPPFRRRYTVGSDHGWIVTADELSNLQVINPLSGVQIDLPPVTELYNVES 135
Query: 549 PFVDEDNDLVYDIPVDIGKEDYKNNI---ISSCICELYVFKAVMSSGNPTTG---IVMAI 710
F+DE L+Y+ D D S L+++ V+ S +P+ G +V+ +
Sbjct: 136 -FIDEQGSLMYNNYEDSMHRDDPLGFPVPYPSQRLRLFLYFRVILSCSPSAGSECVVLLL 194
Query: 711 HGLCKYLEFCRPGKDKAWSSL 773
H L F R G D +W+ L
Sbjct: 195 HSPDGQLSFARIG-DHSWTRL 214
Score = 35.4 bits (80), Expect(2) = 5e-11
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 152 WSQLPKQLLNAITKRLELDDLIRFSFVCQSWKS 250
WS LPK ++ + +LE+ DL+ VC SW++
Sbjct: 6 WSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRA 38
>gb|EEC68131.1| hypothetical protein OsI_36044 [Oryza sativa Indica Group]
Length = 572
Score = 59.7 bits (143), Expect(2) = 3e-10
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 366 LQNSKVYKMEAPE--IADRRIYGSCQGGWLITVHENGEIQMMHPFSKSVIDLPPITELPG 539
L + YK+ P+ I R I GS G W+IT E E+ +++P + I+LP +T +
Sbjct: 162 LAEKRAYKLTMPDPPIRSRYIIGSSHG-WIITADERSELHLVNPITGDQINLPTVTTIKP 220
Query: 540 VNGPFVDEDNDLVYDIPVDIGKEDY---KNNIISSCICELYVFKAVMSSGNPTTG--IVM 704
V + D Y+ P +G + + + S + Y+FK S +P+ G V
Sbjct: 221 VKPVYDDAGVVHNYEYPCHVGGSSHNWAEPSTYSLRLLRKYIFKKAFLSSDPSMGDYFVA 280
Query: 705 AIHGLCKYLEFCRPGKDKAWSSL 773
IH L F R G DK W+ L
Sbjct: 281 LIHYPLAQLSFARAGSDK-WTWL 302
Score = 31.2 bits (69), Expect(2) = 3e-10
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 158 QLPKQLLNAITKRLELDDLIRFSFVCQSWKS 250
+LP+ +L I LE+ DL+R VC SW++
Sbjct: 96 ELPQDVLMEIFALLEVPDLVRAGSVCSSWRA 126
>ref|NP_001068202.1| Os11g0593700 [Oryza sativa Japonica Group]
gi|77551777|gb|ABA94574.1| F-box domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113645424|dbj|BAF28565.1| Os11g0593700 [Oryza sativa
Japonica Group] gi|125577710|gb|EAZ18932.1| hypothetical
protein OsJ_34472 [Oryza sativa Japonica Group]
Length = 423
Score = 55.1 bits (131), Expect(2) = 4e-10
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Frame = +3
Query: 372 NSKVYKMEAPEIADRRIYG-SCQGGWLITVHENGEIQMMHPFSKSVIDLPPITELPGVNG 548
N+ +K+ P RR Y GW++T E +Q+++P S IDLPP+TEL V
Sbjct: 76 NNATFKVRLPGPPFRRRYTVGSDHGWIVTADELSNLQVINPLSGVQIDLPPVTELYNVES 135
Query: 549 PFVDEDNDLVYDIPVDIGKEDYKNNI---ISSCICELYVFKAVMSSGNPTTG---IVMAI 710
F DE L+Y+ D D L+++ V+ S +P+ G +V+ +
Sbjct: 136 -FTDEQGSLMYNNYEDSMHRDDPLGFPVPYPPQRLRLFLYFRVILSCSPSAGSECVVLLL 194
Query: 711 HGLCKYLEFCRPGKDKAWSSL 773
H L F R G D +W+ L
Sbjct: 195 HSPDGQLSFARIG-DHSWTRL 214
Score = 35.4 bits (80), Expect(2) = 4e-10
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 152 WSQLPKQLLNAITKRLELDDLIRFSFVCQSWKS 250
WS LPK ++ + +LE+ DL+ VC SW++
Sbjct: 6 WSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRA 38
>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
gi|223551309|gb|EEF52795.1| conserved hypothetical
protein [Ricinus communis]
Length = 406
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Frame = +3
Query: 366 LQNSKVYKMEAPEIADRRIYGSCQGGWLITVHENGEIQMMHPFSKSVIDLPPITELPGVN 545
L + K Y +E PE ++R GS G WL+ V + I +++P +K+ I+LP ++ P
Sbjct: 70 LADGKTYHLELPETIEKRCCGSSHG-WLVMVEDTPSIFLLNPLTKARIELPSLSTFPYF- 127
Query: 546 GPFVDEDNDLVYDIPVDIGKEDYKNNIISSCICELYVFKAVMSSGNPTTG--IVMAIHGL 719
++VY+ +I +Y N I E Y+ KA++S +P+TG VMAI+
Sbjct: 128 ------PTEVVYENSRNI--NEYFNTKAKLRIRETYIRKAIVSE-DPSTGNFAVMAIYKT 178
Query: 720 CKYLE---FCRPGKDKAWSSLK 776
E FC+ G D W +++
Sbjct: 179 INSTENIAFCKSG-DATWFTIQ 199
Score = 31.2 bits (69), Expect(2) = 1e-09
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 152 WSQLPKQLLNAIT-KRLELDDLIRFSFVCQSWKS 250
WS+LP++LL IT K+ D I VC+SW S
Sbjct: 4 WSELPQELLQTITQKQSNYVDYISTRAVCKSWWS 37
>ref|XP_002451038.1| hypothetical protein SORBIDRAFT_05g023040 [Sorghum bicolor]
gi|241936881|gb|EES10026.1| hypothetical protein
SORBIDRAFT_05g023040 [Sorghum bicolor]
Length = 457
Score = 49.7 bits (117), Expect(2) = 2e-09
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Frame = +3
Query: 363 CLQNSKVYKMEAPE--IADRRIYGSCQGGWLITVHENGEIQMMHPFSKSVIDLPPITELP 536
C ++ +P +A R + GS G WL+T E + +++P + + + LPPIT L
Sbjct: 92 CPSTGATLRIPSPRAPLARRPLLGSGHG-WLVTADEASNLHLLNPVTGAQVALPPITALH 150
Query: 537 GVNGPFVDEDND---------LVYDIPVDIGKEDYKNNIIS-SCICELYVFKAVMSSGNP 686
V DED D L Y+ G+ + K I+ E F+ V+S+G P
Sbjct: 151 HVESG-TDEDGDPAYLVYENLLEYNYITHRGEVNTKPTILEMDDAYECMYFRVVLSAG-P 208
Query: 687 TTG---IVMAIHGLCKYLEFCRPGKDKAWSSLKGDDHGGFSY 803
+ G +V+ +H + F R G D+ GDD G +
Sbjct: 209 SAGRGCVVLLLHMPLGEVSFARLGDDRWTWVAPGDDDTGLPW 250
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 152 WSQLPKQLLNAITKRLELDDLIRFSFVCQSWKS 250
WS+LP+ LL ++ + L +DD +R VC SW S
Sbjct: 25 WSRLPEDLLVSVLRALHVDDAVRSGAVCASWNS 57