BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032074
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    90   9e-23
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    82   1e-22
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]    82   2e-21
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    81   5e-21
emb|CCH50966.1| T4.5 [Malus x robusta]                                105   5e-21

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 89.7 bits (221), Expect(2) = 9e-23
 Identities = 45/120 (37%), Positives = 64/120 (53%)
 Frame = +1

Query: 10  NLLSVYKFVIDNNCSLIFHSTGFYVKDNATKRILFKGHTEKGLYPFPFTXXXXXXXXXXX 189
           NL+S+ +F +DNNC  I  + GF VK+N T RIL +G  E GLY  P             
Sbjct: 389 NLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLY--PLAGCKTFHKSLTC 446

Query: 190 XXXFVTNKTSYPIWHQRLGHPSPQVLHQVLSSNKLILQKFDNCTSFCNYCHLGKSRKLPF 369
               +  + +   WH RLGHPS  + + +  SNKL ++       FC+ C LGK+++LPF
Sbjct: 447 LSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPF 506



 Score = 42.0 bits (97), Expect(2) = 9e-23
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 357 QTSFHSVMCNSKVPLHMIHADLWEPSPVHSISNYGYLATIVDDFTRFCWI 506
           Q  F      S VPL +IH+D+W  SPV S     Y    +DD++R+ W+
Sbjct: 503 QLPFPESSRQSSVPLALIHSDVWV-SPVQSTGGCSYYVLFIDDYSRYSWL 551


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 81.6 bits (200), Expect(2) = 1e-22
 Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   MTHNLLSVYKFVIDNNCSLIFHSTGFYVKDNATKRILFKGHTEKGLYPFPFTXXXXXXXX 180
           +T +LLSV K   D  C++ F S G  + D ATK++L  G T  GLY             
Sbjct: 397 ITKSLLSVSKLTQDYPCTVEFDSDGVRINDKATKKLLIMGSTCDGLY--------CLKDD 448

Query: 181 XXXXXXFVTNK--TSYPIWHQRLGHPSPQVLHQVLSSNKLILQKFDNCTSFCNYCHLGKS 354
                 F T +   S  +WH+RLGHP PQVL Q++ +N + + K     S C  C LGKS
Sbjct: 449 SQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQLVKTNSISINK--TSKSLCEACQLGKS 506

Query: 355 RKLPFI 372
            +LPF+
Sbjct: 507 TRLPFV 512



 Score = 49.7 bits (117), Expect(2) = 1e-22
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = +3

Query: 366 FHSVMCNSKVPLHMIHADLWEPSPVHSISNYGYLATIVDDFTRFCWI 506
           F S    S  PL  +H DLW PSP+ S+  + Y A  +D ++RF WI
Sbjct: 511 FVSSSFTSNRPLERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWI 557


>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 82.4 bits (202), Expect(2) = 2e-21
 Identities = 47/120 (39%), Positives = 65/120 (54%)
 Frame = +1

Query: 10  NLLSVYKFVIDNNCSLIFHSTGFYVKDNATKRILFKGHTEKGLYPFPFTXXXXXXXXXXX 189
           NL+SV+ F   NN  L FH T F VKD  T  IL +G  E G+YP P +           
Sbjct: 365 NLISVHHFTKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGVYPMPSS-------PAAT 417

Query: 190 XXXFVTNKTSYPIWHQRLGHPSPQVLHQVLSSNKLILQKFDNCTSFCNYCHLGKSRKLPF 369
              FV  +TS   WHQRLGHPS +V+ +++SS  L      + ++ C+ C + K+ +LPF
Sbjct: 418 PIAFVHERTSVTGWHQRLGHPSFKVVTRLISSFSLPTTSCLSGSNNCHSCSINKAHQLPF 477



 Score = 44.7 bits (104), Expect(2) = 2e-21
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 357 QTSFHSVMCNSKVPLHMIHADLWEPSPVHSISNYGYLATIVDDFTRFCW 503
           Q  FH     S  P  +++ D+W PSP  S++ + Y    VD FT++ W
Sbjct: 474 QLPFHKHGLTSTTPFDLLYTDVWGPSPTPSLNGHRYYVIFVDHFTKYVW 522


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 80.9 bits (198), Expect(2) = 5e-21
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
 Frame = +1

Query: 10  NLLSVYKFVIDNNCSLIFHSTGFYVKDNATKRILFKGHTEKGLYPFPFTXXXXXXXXXXX 189
           NL+SV +F  DNN    FH   F+VKD  TK+IL +G  E GLY FP             
Sbjct: 446 NLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSS 505

Query: 190 XXXFVTN---KTSYPIWHQRLGHPSPQVLHQVLSSNKLILQKFDNCTSFCNYCHLGKSRK 360
                +N    T+  +WH RLGHP+  +L  +L+S  +  Q   N  + C  C   KS K
Sbjct: 506 SYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNISHQCHKN--NVCCACQFAKSHK 563

Query: 361 LPF 369
           LPF
Sbjct: 564 LPF 566



 Score = 45.1 bits (105), Expect(2) = 5e-21
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 366 FHSVMCNSKVPLHMIHADLWEPSPVHSISNYGYLATIVDDFTRFCWI 506
           F+  +  +  PL ++HADLW P  + S +   Y    VDDF+RF WI
Sbjct: 566 FNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWI 612


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  105 bits (261), Expect = 5e-21
 Identities = 59/133 (44%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +1

Query: 4    THNLLSVYKFVIDNNCSLIFHSTGFYVKDNATKRILFKGHTEKGLYPFPFTXXXXXXXXX 183
            +HNLLSVYKFV DN C L F   GFYVKD +T ++LF+G +E GLYPF +          
Sbjct: 657  SHNLLSVYKFVYDNWCYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIA 716

Query: 184  XXXXXFVTNKTSYPIWHQRLGHPSPQVLHQVLSSNKLILQKFDNCTSFCNYCHLGKSRKL 363
                  +  K     WH+RLGHPS   LH V+  N L +  + N  S C  C LGKS +L
Sbjct: 717  ISPTALMIAKADIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRL 776

Query: 364  PFILL-CVIQRYL 399
             F  L C   R L
Sbjct: 777  SFSTLPCTSSRPL 789



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +3

Query: 363 SFHSVMCNSKVPLHMIHADLWEPSPVHSISNYGYLATIVDDFTRFCWI 506
           SF ++ C S  PL ++H D+W PSP  S + Y +   IVDDFT++ W+
Sbjct: 777 SFSTLPCTSSRPLQLLHTDVWGPSPTSSCTGYRFYLIIVDDFTKYSWL 824