BLASTX nr result

ID: Coptis23_contig00032072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032072
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270292.2| PREDICTED: vacuolar protein 8-like [Vitis vi...   353   4e-95
ref|XP_003608254.1| Importin subunit alpha-2 [Medicago truncatul...   327   2e-87
ref|XP_003532561.1| PREDICTED: uncharacterized protein LOC100809...   325   1e-86
ref|XP_003529292.1| PREDICTED: uncharacterized protein LOC100809...   325   1e-86
ref|XP_002524688.1| ubiquitin-protein ligase, putative [Ricinus ...   319   7e-85

>ref|XP_002270292.2| PREDICTED: vacuolar protein 8-like [Vitis vinifera]
          Length = 579

 Score =  353 bits (905), Expect = 4e-95
 Identities = 186/312 (59%), Positives = 231/312 (74%)
 Frame = +3

Query: 6    MKNQALMALNEILIEDEKYVTTVVEIGGILSLLVKFLEVEDMEIQDESMKVISVITSIDC 185
            MK QAL+A NE++ ED+KYV  VVEIG I+SLL  FL+  +MEIQ+ES K ISVI   D 
Sbjct: 175  MKRQALVAFNEVVNEDDKYVKIVVEIGDIISLLATFLDSLEMEIQEESAKAISVIAGFDM 234

Query: 186  YKSTLVEAGIIGPLIHVLDSGSDLGKEQAARCLQKLTENSDIAWTVSAHGGVTTLLKICS 365
            YKS L+ AG+I PLI VL+ GS+LGKE AARCLQKLTENSD  W++SAHGGVT LLKICS
Sbjct: 235  YKSALIGAGVIAPLIRVLECGSELGKEGAARCLQKLTENSDNVWSISAHGGVTALLKICS 294

Query: 366  NGTCKSELIGPISGVLKNIAVVEEIKRFMVEKGAVSAYIKLLRSTDELVQINAIAFLQVM 545
            +G  K EL+G   GVLKN+A VEEIKRFMVE+GA++A++KL RS DE VQIN+I FLQ +
Sbjct: 295  SGNYKGELVGLACGVLKNLAGVEEIKRFMVEEGAITAFLKLARSKDESVQINSIEFLQSI 354

Query: 546  AFSDEPLLQMIIKEGAIQPLVWILNTKSTFSTKARKTALGAIESLCFSSKNSVNILMSHX 725
             + DE + QM+I+EG I+ LV IL+  S+FS+K R+ AL AIE+LCFSS  ++NIL+SH 
Sbjct: 355  VYGDESIRQMVIREGGIRVLVRILDPNSSFSSKTRERALRAIETLCFSSLGTINILLSHG 414

Query: 726  XXXXXXXXXXGNEVSLKESAVKSVLLLCGTSEEAMKAMGDAGFMSELLTLLDTNCFRIRE 905
                        EV ++E A+K    LCG+SEEA K+MGDAGF+ EL+ LL    F IRE
Sbjct: 415  FMDQLLFFLRNGEVLVQELALKVSFRLCGSSEEAKKSMGDAGFIPELIRLLHAKSFEIRE 474

Query: 906  MTAEALSGMLKV 941
            M AEALS M+ V
Sbjct: 475  MAAEALSSMVLV 486


>ref|XP_003608254.1| Importin subunit alpha-2 [Medicago truncatula]
            gi|355509309|gb|AES90451.1| Importin subunit alpha-2
            [Medicago truncatula]
          Length = 577

 Score =  327 bits (839), Expect = 2e-87
 Identities = 168/314 (53%), Positives = 224/314 (71%), Gaps = 1/314 (0%)
 Frame = +3

Query: 3    GMKNQALMALNEILIEDEKYVTT-VVEIGGILSLLVKFLEVEDMEIQDESMKVISVITSI 179
            GMK QAL  L E+++EDEKYV   VV++  ++ +LV FL   ++EIQ+ES KV+ V+   
Sbjct: 170  GMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGF 229

Query: 180  DCYKSTLVEAGIIGPLIHVLDSGSDLGKEQAARCLQKLTENSDIAWTVSAHGGVTTLLKI 359
            D YK  L+ AG+I PLI VLD GS+LGK  AARCL KLTENSD AW VSAHGGVT LL I
Sbjct: 230  DSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNI 289

Query: 360  CSNGTCKSELIGPISGVLKNIAVVEEIKRFMVEKGAVSAYIKLLRSTDELVQINAIAFLQ 539
            C N  CK +L+GP  GVL+N+  VEE+KRFMVE+ AVS +I+L++S +E +Q+N+I F+Q
Sbjct: 290  CGNDDCKGDLVGPACGVLRNLVGVEEVKRFMVEEDAVSTFIRLVKSKEEAIQVNSIGFIQ 349

Query: 540  VMAFSDEPLLQMIIKEGAIQPLVWILNTKSTFSTKARKTALGAIESLCFSSKNSVNILMS 719
             +AF DE + QM+I+EG I+ L+ +L+ K ++S+K ++  + AIESLCF+S +SV+ILMS
Sbjct: 350  NIAFGDELVRQMVIREGGIRALLRVLDPKWSYSSKTKEITMRAIESLCFTSSSSVSILMS 409

Query: 720  HXXXXXXXXXXXGNEVSLKESAVKSVLLLCGTSEEAMKAMGDAGFMSELLTLLDTNCFRI 899
            +             EVS++E A+K    L GTSEEA KAMGDAGFM E +  L+   F +
Sbjct: 410  YGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFMVEFVKFLNAKSFEV 469

Query: 900  REMTAEALSGMLKV 941
            REM AEALSGM+ V
Sbjct: 470  REMAAEALSGMVTV 483


>ref|XP_003532561.1| PREDICTED: uncharacterized protein LOC100809062 [Glycine max]
          Length = 566

 Score =  325 bits (832), Expect = 1e-86
 Identities = 169/313 (53%), Positives = 220/313 (70%)
 Frame = +3

Query: 3    GMKNQALMALNEILIEDEKYVTTVVEIGGILSLLVKFLEVEDMEIQDESMKVISVITSID 182
            GMK QAL  L E+++EDEKYV  +V++G ++ LLV FL   ++EIQ+ES KV+SV+   D
Sbjct: 161  GMKRQALKNLLEVVVEDEKYVKVIVDVGDVVHLLVGFLGSNEVEIQEESAKVVSVVAGFD 220

Query: 183  CYKSTLVEAGIIGPLIHVLDSGSDLGKEQAARCLQKLTENSDIAWTVSAHGGVTTLLKIC 362
             YK  L+ AG+I PL+ VLD GS LGK  AARCL KLTENSD AW VSAHGGV+ LLKIC
Sbjct: 221  SYKGVLIGAGVIAPLVKVLDCGSVLGKVAAARCLVKLTENSDNAWCVSAHGGVSVLLKIC 280

Query: 363  SNGTCKSELIGPISGVLKNIAVVEEIKRFMVEKGAVSAYIKLLRSTDELVQINAIAFLQV 542
              G C  +L+GP  GVL+N+  VEEIKRFMV++GA   +I+L+RS +E +Q+N+IAF+  
Sbjct: 281  G-GDCGGDLVGPACGVLRNLVGVEEIKRFMVDEGAAVTFIRLVRSKEESIQVNSIAFIVS 339

Query: 543  MAFSDEPLLQMIIKEGAIQPLVWILNTKSTFSTKARKTALGAIESLCFSSKNSVNILMSH 722
            +A  DE + QM+IKEGAI  L+ +L+ K ++S K R+ A+ AIE LCF S +SV +LMS+
Sbjct: 340  IASGDEVVRQMVIKEGAIHALLRVLDPKWSYSCKTREVAMRAIEDLCFCSPSSVGVLMSY 399

Query: 723  XXXXXXXXXXXGNEVSLKESAVKSVLLLCGTSEEAMKAMGDAGFMSELLTLLDTNCFRIR 902
                         EVS++E A+K    LCGTSEEA KAMGDA FM E +  L+   F +R
Sbjct: 400  GFVDQLIYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDARFMPEFVKFLNAKSFEVR 459

Query: 903  EMTAEALSGMLKV 941
            EM AEALSGM+ V
Sbjct: 460  EMAAEALSGMVMV 472


>ref|XP_003529292.1| PREDICTED: uncharacterized protein LOC100809382 [Glycine max]
          Length = 567

 Score =  325 bits (832), Expect = 1e-86
 Identities = 167/313 (53%), Positives = 219/313 (69%)
 Frame = +3

Query: 3    GMKNQALMALNEILIEDEKYVTTVVEIGGILSLLVKFLEVEDMEIQDESMKVISVITSID 182
            GMK QAL  L E+++EDEKYV  +V++G ++ LLV FL   ++EIQ+ES KV+SV+   D
Sbjct: 161  GMKRQALKNLLEVVVEDEKYVKVIVDVGDVVHLLVGFLGSNEVEIQEESAKVVSVVAGFD 220

Query: 183  CYKSTLVEAGIIGPLIHVLDSGSDLGKEQAARCLQKLTENSDIAWTVSAHGGVTTLLKIC 362
             YK  LV AG+I PL+ VLD GS LGK  AARCL KLTENSD AW VSAHGGV+ LLKIC
Sbjct: 221  SYKGVLVCAGVIAPLVKVLDCGSVLGKIAAARCLVKLTENSDNAWCVSAHGGVSVLLKIC 280

Query: 363  SNGTCKSELIGPISGVLKNIAVVEEIKRFMVEKGAVSAYIKLLRSTDELVQINAIAFLQV 542
              G C  +L+GP  GVL+N+  VEEIKRFMV++GAV  +I+L+RS +E +Q+N+I F+  
Sbjct: 281  GGGDCGGDLVGPACGVLRNLVGVEEIKRFMVDEGAVVTFIRLVRSKEEAIQVNSIGFILS 340

Query: 543  MAFSDEPLLQMIIKEGAIQPLVWILNTKSTFSTKARKTALGAIESLCFSSKNSVNILMSH 722
            +A  DE + QM+IKEG I+ L+ +L+ K ++S K R+  + A+E LCF S +SV +LM+ 
Sbjct: 341  IASGDELVRQMVIKEGGIRALLRVLDPKWSYSCKTREVTMRAVEDLCFCSPSSVGVLMNC 400

Query: 723  XXXXXXXXXXXGNEVSLKESAVKSVLLLCGTSEEAMKAMGDAGFMSELLTLLDTNCFRIR 902
                         EVS++E A+K    LCGTSEEA KAMGDAGFM E +  L+   F +R
Sbjct: 401  GFVDQLIYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMPEFVKFLNAKSFEVR 460

Query: 903  EMTAEALSGMLKV 941
            EM AEALSGM+ V
Sbjct: 461  EMAAEALSGMVIV 473


>ref|XP_002524688.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223536049|gb|EEF37707.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 573

 Score =  319 bits (817), Expect = 7e-85
 Identities = 166/312 (53%), Positives = 223/312 (71%)
 Frame = +3

Query: 6    MKNQALMALNEILIEDEKYVTTVVEIGGILSLLVKFLEVEDMEIQDESMKVISVITSIDC 185
            MK QAL+ L E++IEDE+Y   ++EI GI+ +LV  L+  ++EIQ+++ KV+S+I+  D 
Sbjct: 168  MKKQALVNLYEVVIEDERYAKVILEIDGIVHILVNLLDSPEVEIQEQAAKVVSIISGFDS 227

Query: 186  YKSTLVEAGIIGPLIHVLDSGSDLGKEQAARCLQKLTENSDIAWTVSAHGGVTTLLKICS 365
             KS L+ +G+IG  + VL+ GS  GKE AAR LQKLTENSD AW+VSAHGGVT LLKIC+
Sbjct: 228  CKSVLIGSGVIGSSVKVLEIGSVSGKEAAARSLQKLTENSDNAWSVSAHGGVTALLKICA 287

Query: 366  NGTCKSELIGPISGVLKNIAVVEEIKRFMVEKGAVSAYIKLLRSTDELVQINAIAFLQVM 545
            N   + ELIGP  GVL+N+  VEEIKRFM+E+GAV+ +I+L RS DE VQI++I FLQ +
Sbjct: 288  NVDSRGELIGPACGVLRNLVGVEEIKRFMIEEGAVTKFIRLARSRDESVQISSIEFLQNI 347

Query: 546  AFSDEPLLQMIIKEGAIQPLVWILNTKSTFSTKARKTALGAIESLCFSSKNSVNILMSHX 725
            AF DE + Q+I++EG I+ LV +L+ K   + K+R+ AL AIESLCFSS N ++ L+S+ 
Sbjct: 348  AFGDESIRQLIVREGGIRTLVHVLDPKIASTCKSREIALRAIESLCFSSANCISTLISYG 407

Query: 726  XXXXXXXXXXGNEVSLKESAVKSVLLLCGTSEEAMKAMGDAGFMSELLTLLDTNCFRIRE 905
                        +VS++E A+K    LCG SEEA KAMGDAGFMSE +  LD   F +RE
Sbjct: 408  FIEMLLFFLRNGDVSVQELALKVAFRLCGKSEEAKKAMGDAGFMSEYVKFLDAKSFEVRE 467

Query: 906  MTAEALSGMLKV 941
            M +EAL+ ML V
Sbjct: 468  MASEALTSMLSV 479


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