BLASTX nr result

ID: Coptis23_contig00032071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032071
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif...   107   1e-21
gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]          106   2e-21
ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu...   105   4e-21
ref|XP_002275557.1| PREDICTED: putative expansin-B2 [Vitis vinif...    95   5e-18
ref|XP_002278559.1| PREDICTED: putative expansin-B2 [Vitis vinif...    94   1e-17

>ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297743578|emb|CBI36445.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/60 (81%), Positives = 51/60 (85%)
 Frame = -2

Query: 282 WREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNFL 103
           WR MQQSWG VWKLDAG EL  PFSI+L SQYSGQTLVA NVIP GWKPG TYRSLVN+L
Sbjct: 220 WRAMQQSWGAVWKLDAGYELKPPFSIQLTSQYSGQTLVAKNVIPDGWKPGSTYRSLVNYL 279


>gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]
          Length = 279

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/59 (79%), Positives = 51/59 (86%)
 Frame = -2

Query: 282 WREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNF 106
           WR+MQQSWG VWKLDAGSELH PFSIRL SQYS Q L+A NVIP GW+PG TYRSLVN+
Sbjct: 219 WRQMQQSWGAVWKLDAGSELHPPFSIRLTSQYSDQILIAKNVIPTGWQPGATYRSLVNY 277


>ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum]
           gi|81367673|gb|ABB71677.1| beta expansin precursor
           [Solanum lycopersicum]
          Length = 285

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = -2

Query: 282 WREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNF 106
           WR+MQQSWG VWKLDAGS+LH PFSIRL SQYS Q L+A NVIP GW+PG TYRSLVN+
Sbjct: 225 WRQMQQSWGAVWKLDAGSKLHPPFSIRLTSQYSDQILIANNVIPTGWQPGATYRSLVNY 283


>ref|XP_002275557.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297734541|emb|CBI16592.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/62 (72%), Positives = 49/62 (79%)
 Frame = -2

Query: 291 SMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLV 112
           S +W  MQQSWG VWKLD+GS L APFSIRL +  SG TLVA NVIP GW+PG TYRSLV
Sbjct: 210 SNSWVPMQQSWGAVWKLDSGSGLRAPFSIRLTALESGNTLVAKNVIPAGWQPGKTYRSLV 269

Query: 111 NF 106
           NF
Sbjct: 270 NF 271


>ref|XP_002278559.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297734537|emb|CBI16588.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/63 (69%), Positives = 49/63 (77%)
 Frame = -2

Query: 294 ESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSL 115
           +S  W  MQQSWG VWKLD GSEL APFSI+L +  SG TLVA NVIP GW+PG TYRS+
Sbjct: 209 DSDMWVPMQQSWGAVWKLDYGSELRAPFSIKLTALESGNTLVAKNVIPAGWQPGKTYRSV 268

Query: 114 VNF 106
           VNF
Sbjct: 269 VNF 271


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