BLASTX nr result

ID: Coptis23_contig00032067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032067
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   125   4e-27
emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   125   4e-27
ref|XP_002517546.1| Gibberellin 20 oxidase, putative [Ricinus co...   122   4e-26
gb|AFK40822.1| unknown [Medicago truncatula]                          120   2e-25
ref|XP_003531692.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin ...   119   2e-25

>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
           gi|297743336|emb|CBI36203.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/108 (52%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = -3

Query: 321 LRLMVYT-PQGSETR-GLPAHTDKCFVTVLHQNQINGLQVLTKEGEWFPLAPSSPKSFIV 148
           LRL+ Y  PQ +ET  G   HTDK F+TVLHQN++ GL++ TK+GEW    PS P S++V
Sbjct: 166 LRLIKYRGPQKNETCIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPS-PSSYVV 224

Query: 147 MIGESFVAWSNGRLHCPRHHVVMNGHDTRYAIAMFSFNKGVVETPEEL 4
           M G++ +AWSNGR+H P H V+MNG+  RY+I +F++++G++E PEEL
Sbjct: 225 MAGDALLAWSNGRIHSPEHRVIMNGNKARYSIGLFAYHRGIIEIPEEL 272


>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/108 (52%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = -3

Query: 321 LRLMVYT-PQGSETR-GLPAHTDKCFVTVLHQNQINGLQVLTKEGEWFPLAPSSPKSFIV 148
           LRL+ Y  PQ +ET  G   HTDK F+TVLHQN++ GL++ TK+GEW    PS P S++V
Sbjct: 166 LRLIKYRGPQKNETCIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPS-PSSYVV 224

Query: 147 MIGESFVAWSNGRLHCPRHHVVMNGHDTRYAIAMFSFNKGVVETPEEL 4
           M G++ +AWSNGR+H P H V+MNG+  RY+I +F++++G++E PEEL
Sbjct: 225 MAGDALLAWSNGRIHSPEHRVIMNGNKARYSIGLFAYHRGIIEIPEEL 272


>ref|XP_002517546.1| Gibberellin 20 oxidase, putative [Ricinus communis]
           gi|223543178|gb|EEF44710.1| Gibberellin 20 oxidase,
           putative [Ricinus communis]
          Length = 321

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/108 (50%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
 Frame = -3

Query: 318 RLMVYTP--QGSETRGLPAHTDKCFVTVLHQNQINGLQVLTKEGEWFPLAPSSPKSFIVM 145
           R+M Y    +G    G   HTDK F+TVLHQN+++GL+V TK+G+W    PSSP SFIVM
Sbjct: 169 RMMKYRAPTEGESDLGCDVHTDKGFITVLHQNEVSGLEVQTKDGQWVCFEPSSPSSFIVM 228

Query: 144 IGESFVAWSNGRLHCPRHHVVMNGHDTRYAIAMFSFNKGVVETPEELV 1
             ++ +AWSNGR+H   H VVM G   RY++ +FS+ KG+ E PEEL+
Sbjct: 229 AADALLAWSNGRIHAAFHRVVMRGSKARYSVGLFSYLKGITEVPEELI 276


>gb|AFK40822.1| unknown [Medicago truncatula]
          Length = 315

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 4/111 (3%)
 Frame = -3

Query: 321 LRLMVYT-PQGSETR-GLPAHTDKCFVTVLHQNQINGLQVLTKEGEWFPLAPSSPKSFIV 148
           LR+M Y  PQ S+T+ GL  H+DK  VT+L+QNQ+ GL+V+TK+G+W    PSS  SF+ 
Sbjct: 167 LRVMKYKGPQTSDTKLGLSTHSDKNVVTILYQNQVEGLEVMTKDGQWISYKPSSSGSFVA 226

Query: 147 MIGESFVAWSNGRLHCPRHHVVMNGHDTRYAIAMFSFNKG--VVETPEELV 1
           MIG+S  AWSNGRLH P H V+M+G++ RY+  +FS  KG  +++ PEELV
Sbjct: 227 MIGDSIHAWSNGRLHSPFHRVMMSGNEARYSTGLFSIPKGGYIIKAPEELV 277


>ref|XP_003531692.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin 20 oxidase 1-like
           [Glycine max]
          Length = 314

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 4/111 (3%)
 Frame = -3

Query: 321 LRLMVYT-PQGSETR-GLPAHTDKCFVTVLHQNQINGLQVLTKEGEWFPLAPSSPKSFIV 148
           LR+M Y  PQ S+T+ GL AHTDK  VT+L+QN++ GL+V+ K+G+W    PS P SF+V
Sbjct: 167 LRVMKYKGPQTSDTKLGLXAHTDKNIVTILYQNEVEGLEVMNKDGKWISYKPS-PDSFVV 225

Query: 147 MIGESFVAWSNGRLHCPRHHVVMNGHDTRYAIAMFSFNKG--VVETPEELV 1
           MIG+S  AWSNGRLH P H V+M+G++ RY+  +FS  KG  +++ PEELV
Sbjct: 226 MIGDSLHAWSNGRLHSPFHRVIMSGNEARYSAGLFSIPKGGSIIKAPEELV 276


Top