BLASTX nr result

ID: Coptis23_contig00032058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032058
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521029.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
emb|CAN78770.1| hypothetical protein VITISV_024249 [Vitis vinifera]    58   9e-07
ref|XP_003589440.1| hypothetical protein MTR_1g024370 [Medicago ...    55   5e-06

>ref|XP_002521029.1| conserved hypothetical protein [Ricinus communis]
           gi|223539866|gb|EEF41446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = -2

Query: 209 LQRIVPGGHGLEPDRLFLQTANYILHLKLQVNMLQALSMMY 87
           LQR++PGG  L+PDRLFL+TA+YILHL+LQVN+LQALS +Y
Sbjct: 46  LQRLIPGGEELQPDRLFLRTADYILHLELQVNVLQALSEIY 86


>emb|CAN78770.1| hypothetical protein VITISV_024249 [Vitis vinifera]
          Length = 77

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/41 (63%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
 Frame = -2

Query: 209 LQRIVPGGHGLEPDRLFLQTANYILHLKLQVN-MLQALSMM 90
           LQR++PGG GL+PDRLFL+TA+YILHL+LQ+  +L A++M+
Sbjct: 29  LQRLIPGGRGLQPDRLFLRTADYILHLRLQMGILLYAVTML 69


>ref|XP_003589440.1| hypothetical protein MTR_1g024370 [Medicago truncatula]
           gi|357516789|ref|XP_003628683.1| hypothetical protein
           MTR_8g063410 [Medicago truncatula]
           gi|355478488|gb|AES59691.1| hypothetical protein
           MTR_1g024370 [Medicago truncatula]
           gi|355522705|gb|AET03159.1| hypothetical protein
           MTR_8g063410 [Medicago truncatula]
          Length = 72

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = -2

Query: 209 LQRIVPGGHGLEPDRLFLQTANYILHLKLQVNMLQALSMMY 87
           LQRI+PGG GL+ D+LFL+TA +IL L+LQ+N LQAL+ ++
Sbjct: 30  LQRIIPGGDGLKADQLFLRTAEHILQLRLQLNALQALTKIF 70


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