BLASTX nr result

ID: Coptis23_contig00032051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032051
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycin...   268   3e-70
emb|CBI25508.3| unnamed protein product [Vitis vinifera]              267   8e-70
ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   267   8e-70
emb|CAN76468.1| hypothetical protein VITISV_030042 [Vitis vinifera]   267   8e-70
gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphor...   265   3e-69

>ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
           gi|255641162|gb|ACU20858.1| unknown [Glycine max]
          Length = 319

 Score =  268 bits (685), Expect = 3e-70
 Identities = 135/152 (88%), Positives = 146/152 (96%)
 Frame = -2

Query: 456 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 277
           LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL
Sbjct: 118 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 177

Query: 276 LSKLGIRPFSYGLVVQTVYDNGSVFSPEVLNLSDDDLVERFYAGVSMATSLSLAISYPTL 97
           L+KLGIRPFSYGLVV +VYDNGSVFSPEVL+L++DDL+E+F AGVSM TSLSLAISYPTL
Sbjct: 178 LAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPTL 237

Query: 96  AAASHMFINSYKNILAVAVGTDYSFSQADKVK 1
           AAA HMF+N+YKN+LAVAV TDYSF +ADKVK
Sbjct: 238 AAAPHMFVNAYKNVLAVAVETDYSFPEADKVK 269


>emb|CBI25508.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  267 bits (682), Expect = 8e-70
 Identities = 134/152 (88%), Positives = 146/152 (96%)
 Frame = -2

Query: 456 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 277
           LVAPIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL
Sbjct: 90  LVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 149

Query: 276 LSKLGIRPFSYGLVVQTVYDNGSVFSPEVLNLSDDDLVERFYAGVSMATSLSLAISYPTL 97
           L+KLGIRPFSYGLVV +VYDNGSVFSPEVL+L+++DL+E+F AGVSM TSLSLAISYPTL
Sbjct: 150 LAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTL 209

Query: 96  AAASHMFINSYKNILAVAVGTDYSFSQADKVK 1
           AAA HMFIN+YKN+LAVAV T+YSF QADKVK
Sbjct: 210 AAAPHMFINAYKNVLAVAVATEYSFPQADKVK 241


>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  267 bits (682), Expect = 8e-70
 Identities = 134/152 (88%), Positives = 146/152 (96%)
 Frame = -2

Query: 456 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 277
           LVAPIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL
Sbjct: 118 LVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 177

Query: 276 LSKLGIRPFSYGLVVQTVYDNGSVFSPEVLNLSDDDLVERFYAGVSMATSLSLAISYPTL 97
           L+KLGIRPFSYGLVV +VYDNGSVFSPEVL+L+++DL+E+F AGVSM TSLSLAISYPTL
Sbjct: 178 LAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTL 237

Query: 96  AAASHMFINSYKNILAVAVGTDYSFSQADKVK 1
           AAA HMFIN+YKN+LAVAV T+YSF QADKVK
Sbjct: 238 AAAPHMFINAYKNVLAVAVATEYSFPQADKVK 269


>emb|CAN76468.1| hypothetical protein VITISV_030042 [Vitis vinifera]
          Length = 303

 Score =  267 bits (682), Expect = 8e-70
 Identities = 134/152 (88%), Positives = 146/152 (96%)
 Frame = -2

Query: 456 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 277
           LVAPIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL
Sbjct: 101 LVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 160

Query: 276 LSKLGIRPFSYGLVVQTVYDNGSVFSPEVLNLSDDDLVERFYAGVSMATSLSLAISYPTL 97
           L+KLGIRPFSYGLVV +VYDNGSVFSPEVL+L+++DL+E+F AGVSM TSLSLAISYPTL
Sbjct: 161 LAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTL 220

Query: 96  AAASHMFINSYKNILAVAVGTDYSFSQADKVK 1
           AAA HMFIN+YKN+LAVAV T+YSF QADKVK
Sbjct: 221 AAAPHMFINAYKNVLAVAVATEYSFPQADKVK 252


>gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphorbia esula]
          Length = 317

 Score =  265 bits (677), Expect = 3e-69
 Identities = 132/152 (86%), Positives = 145/152 (95%)
 Frame = -2

Query: 456 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 277
           LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL
Sbjct: 115 LVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAAL 174

Query: 276 LSKLGIRPFSYGLVVQTVYDNGSVFSPEVLNLSDDDLVERFYAGVSMATSLSLAISYPTL 97
           L+KLGIRPFSYGLVVQTVYD+G+VFSPEVLNL++DDL+ +F  GVSM TSL+L++SYPTL
Sbjct: 175 LAKLGIRPFSYGLVVQTVYDSGTVFSPEVLNLTEDDLMAKFAIGVSMITSLALSVSYPTL 234

Query: 96  AAASHMFINSYKNILAVAVGTDYSFSQADKVK 1
           AAA HMFIN+YKN+LA+AV TDYSF QADKVK
Sbjct: 235 AAAPHMFINAYKNVLAIAVSTDYSFPQADKVK 266


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